Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CDC42SE1Q9NRR8 HTR7P1-202ENST00000624664 4411 ntBASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 AL049812.1-201ENST00000432563 2267 ntBASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
CDC42SE1Q9NRR8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 MVK-208ENST00000539696 608 ntTSL 5 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 PKD1P1-201ENST00000458669 6805 ntBASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 AC079598.2-202ENST00000546624 1451 ntBASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 PCDHAC2-203ENST00000615316 3011 ntBASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 PRORSD1P-202ENST00000563365 2154 ntBASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 AL513477.1-201ENST00000602865 2407 ntBASIC10.92□□□□□ -0.66
CDC42SE1Q9NRR8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 AC127502.1-201ENST00000399971 1502 ntBASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 TNRC18P3-201ENST00000441896 2691 ntBASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 BID-204ENST00000399767 2129 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE1Q9NRR8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms