Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 AC090877.2-201ENST00000558441 1738 ntBASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC24A3Q9HC58 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC24A3Q9HC58 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SLC24A3Q9HC58 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC24A3Q9HC58 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SLC24A3Q9HC58 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 AC004448.1-201ENST00000458332 883 ntBASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 SUDS3P1-201ENST00000505831 966 ntBASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 AC104564.3-201ENST00000582367 638 ntBASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 AC092666.2-201ENST00000613287 246 ntBASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC24A3Q9HC58 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 ZNRF2P3-201ENST00000424200 374 ntBASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC24A3Q9HC58 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC24A3Q9HC58 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC24A3Q9HC58 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC24A3Q9HC58 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC24A3Q9HC58 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms