Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 AC012414.1-201ENST00000556676 535 ntBASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSMEM1Q8N8F7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.29■□□□□ 0.68
LSMEM1Q8N8F7 AC073130.3-201ENST00000624389 2278 ntBASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSMEM1Q8N8F7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.27■□□□□ 0.68
LSMEM1Q8N8F7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.27■□□□□ 0.67
LSMEM1Q8N8F7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSMEM1Q8N8F7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSMEM1Q8N8F7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LSMEM1Q8N8F7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.27■□□□□ 0.67
LSMEM1Q8N8F7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 AL354811.1-201ENST00000610286 706 ntBASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSMEM1Q8N8F7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSMEM1Q8N8F7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 AL049796.1-201ENST00000565336 1766 ntBASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms