Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LDB1Q86U70 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.04■□□□□ 0.96
LDB1Q86U70 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB1Q86U70 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDB1Q86U70 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.03■□□□□ 0.96
LDB1Q86U70 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.03■□□□□ 0.96
LDB1Q86U70 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.03■□□□□ 0.96
LDB1Q86U70 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.03■□□□□ 0.96
LDB1Q86U70 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.03■□□□□ 0.96
LDB1Q86U70 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDB1Q86U70 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDB1Q86U70 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LDB1Q86U70 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.02■□□□□ 0.96
LDB1Q86U70 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.02■□□□□ 0.96
LDB1Q86U70 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.02■□□□□ 0.96
LDB1Q86U70 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.02■□□□□ 0.96
LDB1Q86U70 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LDB1Q86U70 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
LDB1Q86U70 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LDB1Q86U70 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LDB1Q86U70 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.01■□□□□ 0.95
LDB1Q86U70 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.01■□□□□ 0.95
LDB1Q86U70 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
LDB1Q86U70 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LDB1Q86U70 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.01■□□□□ 0.95
LDB1Q86U70 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.01■□□□□ 0.95
LDB1Q86U70 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.01■□□□□ 0.95
LDB1Q86U70 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LDB1Q86U70 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LDB1Q86U70 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21■□□□□ 0.95
LDB1Q86U70 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21■□□□□ 0.95
LDB1Q86U70 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
LDB1Q86U70 FXN-202ENST00000396364 980 ntTSL 5 BASIC21■□□□□ 0.95
LDB1Q86U70 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LDB1Q86U70 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDB1Q86U70 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21■□□□□ 0.95
LDB1Q86U70 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21■□□□□ 0.95
LDB1Q86U70 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB1Q86U70 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LDB1Q86U70 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LDB1Q86U70 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB1Q86U70 AC027612.3-201ENST00000413684 1047 ntBASIC20.99■□□□□ 0.95
LDB1Q86U70 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.99■□□□□ 0.95
LDB1Q86U70 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDB1Q86U70 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDB1Q86U70 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.99■□□□□ 0.95
LDB1Q86U70 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.99■□□□□ 0.95
LDB1Q86U70 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.99■□□□□ 0.95
LDB1Q86U70 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.99■□□□□ 0.95
LDB1Q86U70 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDB1Q86U70 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB1Q86U70 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDB1Q86U70 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDB1Q86U70 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDB1Q86U70 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDB1Q86U70 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.98■□□□□ 0.95
LDB1Q86U70 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDB1Q86U70 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.98■□□□□ 0.95
LDB1Q86U70 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LDB1Q86U70 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.98■□□□□ 0.95
LDB1Q86U70 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDB1Q86U70 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDB1Q86U70 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDB1Q86U70 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.97■□□□□ 0.95
LDB1Q86U70 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.97■□□□□ 0.95
LDB1Q86U70 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB1Q86U70 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
LDB1Q86U70 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDB1Q86U70 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDB1Q86U70 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms