Protein–RNA interactions for Protein: Q3KPI0

CEACAM21, Carcinoembryonic antigen-related cell adhesion molecule 21, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM21Q3KPI0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 TPRG1LP1-201ENST00000598702 760 ntBASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CEACAM21Q3KPI0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CEACAM21Q3KPI0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.99■□□□□ 0.47
CEACAM21Q3KPI0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 MIR6084-201ENST00000622012 110 ntBASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 AL049796.1-201ENST00000565336 1766 ntBASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CEACAM21Q3KPI0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CEACAM21Q3KPI0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 AC027612.3-201ENST00000413684 1047 ntBASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 AC053503.5-201ENST00000601508 636 ntBASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CEACAM21Q3KPI0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 EEF1DP3-203ENST00000566025 782 ntBASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.95■□□□□ 0.46
CEACAM21Q3KPI0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms