Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.86■□□□□ 0.77
NR1H2P55055 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.86■□□□□ 0.77
NR1H2P55055 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NR1H2P55055 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NR1H2P55055 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H2P55055 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H2P55055 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NR1H2P55055 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NR1H2P55055 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H2P55055 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NR1H2P55055 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.85■□□□□ 0.77
NR1H2P55055 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NR1H2P55055 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H2P55055 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H2P55055 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.85■□□□□ 0.77
NR1H2P55055 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H2P55055 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
NR1H2P55055 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.85■□□□□ 0.77
NR1H2P55055 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H2P55055 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.84■□□□□ 0.77
NR1H2P55055 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NR1H2P55055 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.84■□□□□ 0.77
NR1H2P55055 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NR1H2P55055 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.84■□□□□ 0.77
NR1H2P55055 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 AC142381.2-201ENST00000566120 298 ntBASIC19.84■□□□□ 0.77
NR1H2P55055 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NR1H2P55055 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NR1H2P55055 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.84■□□□□ 0.77
NR1H2P55055 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.84■□□□□ 0.77
NR1H2P55055 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.84■□□□□ 0.77
NR1H2P55055 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NR1H2P55055 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H2P55055 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.84■□□□□ 0.77
NR1H2P55055 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NR1H2P55055 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H2P55055 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H2P55055 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.83■□□□□ 0.77
NR1H2P55055 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
NR1H2P55055 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H2P55055 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H2P55055 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NR1H2P55055 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H2P55055 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.83■□□□□ 0.77
NR1H2P55055 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.83■□□□□ 0.77
NR1H2P55055 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NR1H2P55055 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NR1H2P55055 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.83■□□□□ 0.76
NR1H2P55055 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NR1H2P55055 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H2P55055 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NR1H2P55055 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.82■□□□□ 0.76
NR1H2P55055 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.82■□□□□ 0.76
NR1H2P55055 EDA-201ENST00000338901 1233 ntBASIC19.82■□□□□ 0.76
NR1H2P55055 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.82■□□□□ 0.76
NR1H2P55055 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.82■□□□□ 0.76
NR1H2P55055 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
NR1H2P55055 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.82■□□□□ 0.76
NR1H2P55055 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NR1H2P55055 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.81■□□□□ 0.76
NR1H2P55055 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.81■□□□□ 0.76
NR1H2P55055 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.81■□□□□ 0.76
NR1H2P55055 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NR1H2P55055 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
NR1H2P55055 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.81■□□□□ 0.76
NR1H2P55055 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.81■□□□□ 0.76
NR1H2P55055 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NR1H2P55055 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.81■□□□□ 0.76
NR1H2P55055 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.81■□□□□ 0.76
NR1H2P55055 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.81■□□□□ 0.76
NR1H2P55055 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H2P55055 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.8■□□□□ 0.76
NR1H2P55055 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms