Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.292e-30■■■□□ 19.2
NCBP2P52298 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.242e-30■■■□□ 19.2
NCBP2P52298 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.182e-30■■■□□ 19.2
NCBP2P52298 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.182e-30■■■□□ 19.2
NCBP2P52298 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.442e-30■■■□□ 19.2
NCBP2P52298 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.442e-30■■■□□ 19.2
NCBP2P52298 BCAR1-213ENST00000563323 558 ntTSL 318.7■□□□□ 0.585e-7■■■□□ 19.2
NCBP2P52298 BCAR1-220ENST00000568864 556 ntTSL 413.26□□□□□ -0.295e-7■■■□□ 19.2
NCBP2P52298 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.7□□□□□ -0.221e-25■■■□□ 19.2
NCBP2P52298 GAS5-214ENST00000436656 822 ntTSL 38.68□□□□□ -1.021e-25■■■□□ 19.2
NCBP2P52298 GAS5-216ENST00000443799 897 ntTSL 58.68□□□□□ -1.021e-25■■■□□ 19.2
NCBP2P52298 GAS5-210ENST00000431268 1698 ntTSL 28.13□□□□□ -1.111e-25■■■□□ 19.2
NCBP2P52298 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.55□□□□□ -1.21e-25■■■□□ 19.2
NCBP2P52298 GAS5-226ENST00000455838 632 ntTSL 27.55□□□□□ -1.21e-25■■■□□ 19.2
NCBP2P52298 GAS5-220ENST00000449589 712 ntTSL 37.55□□□□□ -1.21e-25■■■□□ 19.2
NCBP2P52298 GAS5-203ENST00000416952 799 ntTSL 27.23□□□□□ -1.251e-25■■■□□ 19.2
NCBP2P52298 GAS5-227ENST00000456293 583 ntTSL 36.66□□□□□ -1.341e-25■■■□□ 19.2
NCBP2P52298 GAS5-201ENST00000412059 979 ntTSL 55.07□□□□□ -1.61e-25■■■□□ 19.2
NCBP2P52298 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.79□□□□□ -1.81e-25■■■□□ 19.2
NCBP2P52298 GAS5-204ENST00000421068 1060 ntTSL 22.9□□□□□ -1.951e-25■■■□□ 19.2
NCBP2P52298 GAS5-229ENST00000458220 469 ntTSL 22.86□□□□□ -1.951e-25■■■□□ 19.2
NCBP2P52298 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.18□□□□□ -2.061e-25■■■□□ 19.2
NCBP2P52298 PLCXD1-211ENST00000484611 540 ntTSL 414.09□□□□□ -0.154e-8■■■□□ 19.2
NCBP2P52298 PLCXD1-206ENST00000430923 587 ntAPPRIS ALT2 TSL 213.79□□□□□ -0.24e-8■■■□□ 19.2
NCBP2P52298 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.534e-8■■■□□ 19.2
NCBP2P52298 NUP58-203ENST00000381747 1659 ntTSL 517.89■□□□□ 0.454e-8■■■□□ 19.2
NCBP2P52298 NUP58-208ENST00000466694 1854 ntTSL 516.04■□□□□ 0.164e-8■■■□□ 19.2
NCBP2P52298 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.054e-8■■■□□ 19.2
NCBP2P52298 NUP58-212ENST00000481980 605 ntTSL 315.16■□□□□ 0.024e-8■■■□□ 19.2
NCBP2P52298 NUP58-211ENST00000480187 588 ntTSL 214.14□□□□□ -0.154e-8■■■□□ 19.2
NCBP2P52298 NUP58-213ENST00000490231 563 ntTSL 414.14□□□□□ -0.154e-8■■■□□ 19.2
NCBP2P52298 NUP58-214ENST00000495460 947 ntTSL 513.43□□□□□ -0.264e-8■■■□□ 19.2
NCBP2P52298 NUP58-205ENST00000460326 582 ntTSL 212.96□□□□□ -0.334e-8■■■□□ 19.2
NCBP2P52298 NUP58-207ENST00000465068 551 ntTSL 412.62□□□□□ -0.394e-8■■■□□ 19.2
NCBP2P52298 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.6□□□□□ -0.394e-8■■■□□ 19.2
NCBP2P52298 NUP58-202ENST00000381736 4332 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.684e-8■■■□□ 19.2
NCBP2P52298 NAPG-203ENST00000580483 1516 ntTSL 310.94□□□□□ -0.661e-14■■■□□ 19.2
NCBP2P52298 NAPG-202ENST00000580224 1245 ntTSL 26.86□□□□□ -1.311e-14■■■□□ 19.2
NCBP2P52298 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.411e-14■■■□□ 19.2
NCBP2P52298 NAPG-204ENST00000580746 743 ntTSL 23.8□□□□□ -1.81e-14■■■□□ 19.2
NCBP2P52298 NAPG-206ENST00000582978 887 ntTSL 23.01□□□□□ -1.931e-14■■■□□ 19.2
NCBP2P52298 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.488e-8■■■□□ 19.2
NCBP2P52298 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC11.23□□□□□ -0.618e-8■■■□□ 19.2
NCBP2P52298 MBIP-202ENST00000359527 1449 ntTSL 1 (best) BASIC9.69□□□□□ -0.868e-8■■■□□ 19.2
NCBP2P52298 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.098e-8■■■□□ 19.2
NCBP2P52298 MBIP-204ENST00000603139 702 ntTSL 54.47□□□□□ -1.698e-8■■■□□ 19.2
NCBP2P52298 MBIP-208ENST00000604336 853 ntTSL 53.46□□□□□ -1.868e-8■■■□□ 19.2
NCBP2P52298 MBIP-210ENST00000605579 952 ntTSL 22.92□□□□□ -1.948e-8■■■□□ 19.2
NCBP2P52298 MYSM1-205ENST00000483003 378 ntTSL 1 (best)15.77■□□□□ 0.121e-6■■■□□ 19.1
NCBP2P52298 MYSM1-202ENST00000466774 560 ntTSL 315.74■□□□□ 0.111e-6■■■□□ 19.1
NCBP2P52298 MYSM1-206ENST00000489282 698 ntTSL 215.74■□□□□ 0.111e-6■■■□□ 19.1
NCBP2P52298 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.861e-6■■■□□ 19.1
NCBP2P52298 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.2■□□□□ 0.664e-8■■■□□ 19.1
NCBP2P52298 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.59■□□□□ 0.094e-8■■■□□ 19.1
NCBP2P52298 HCG18-234ENST00000413358 916 ntTSL 3 BASIC8.41□□□□□ -1.064e-8■■■□□ 19.1
NCBP2P52298 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.31e-6■■■□□ 19.1
NCBP2P52298 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.3■□□□□ 0.21e-6■■■□□ 19.1
NCBP2P52298 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.95■□□□□ 0.141e-6■■■□□ 19.1
NCBP2P52298 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.79■□□□□ 0.121e-6■■■□□ 19.1
NCBP2P52298 PLXNA3-208ENST00000495040 421 ntTSL 524.28■■□□□ 1.487e-16■■■□□ 19.1
NCBP2P52298 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.221e-14■■■□□ 19.1
NCBP2P52298 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.062e-6■■■□□ 19.1
NCBP2P52298 DNAJC5-202ENST00000470551 5287 ntTSL 213.85□□□□□ -0.192e-6■■■□□ 19.1
NCBP2P52298 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.64e-10■■■□□ 19.1
NCBP2P52298 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.764e-10■■■□□ 19.1
NCBP2P52298 SPATS2L-216ENST00000444012 605 ntTSL 417.63■□□□□ 0.415e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.15e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.235e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-214ENST00000439084 584 ntTSL 313.1□□□□□ -0.315e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.525e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC9.67□□□□□ -0.865e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.115e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-215ENST00000439395 561 ntTSL 45.31□□□□□ -1.565e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-211ENST00000423749 771 ntTSL 516.6■□□□□ 0.255e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-212ENST00000428692 541 ntTSL 416.42■□□□□ 0.225e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-220ENST00000457757 835 ntTSL 516.42■□□□□ 0.225e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.32■□□□□ 0.045e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-226ENST00000471601 1730 ntTSL 212.53□□□□□ -0.45e-7■■■□□ 19.1
NCBP2P52298 SPATS2L-219ENST00000453663 637 ntTSL 48.43□□□□□ -1.065e-7■■■□□ 19.1
NCBP2P52298 CACNA2D4-215ENST00000542340 558 ntTSL 318.49■□□□□ 0.553e-7■■■□□ 19
NCBP2P52298 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.323e-7■■■□□ 19
NCBP2P52298 CACNA2D4-211ENST00000540728 596 ntTSL 215.72■□□□□ 0.113e-7■■■□□ 19
NCBP2P52298 CACNA2D4-212ENST00000541331 498 ntTSL 415.52■□□□□ 0.083e-7■■■□□ 19
NCBP2P52298 NEK7-205ENST00000442588 519 ntTSL 515.33■□□□□ 0.043e-7■■■□□ 19
NCBP2P52298 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.033e-7■■■□□ 19
NCBP2P52298 CACNA2D4-217ENST00000545595 1615 ntTSL 1 (best)14.83□□□□□ -0.043e-7■■■□□ 19
NCBP2P52298 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.93□□□□□ -0.183e-7■■■□□ 19
NCBP2P52298 CACNA2D4-205ENST00000536846 895 ntTSL 513.83□□□□□ -0.23e-7■■■□□ 19
NCBP2P52298 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.65□□□□□ -0.223e-7■■■□□ 19
NCBP2P52298 CACNA2D4-225ENST00000589502 680 ntTSL 313.3□□□□□ -0.283e-7■■■□□ 19
NCBP2P52298 CACNA2D4-201ENST00000280663 5936 ntTSL 213.17□□□□□ -0.33e-7■■■□□ 19
NCBP2P52298 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC11.82□□□□□ -0.523e-7■■■□□ 19
NCBP2P52298 CACNA2D4-207ENST00000537923 556 ntTSL 411.76□□□□□ -0.533e-7■■■□□ 19
NCBP2P52298 CACNA2D4-206ENST00000537784 2876 ntTSL 1 (best)11.16□□□□□ -0.623e-7■■■□□ 19
NCBP2P52298 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.633e-7■■■□□ 19
NCBP2P52298 CACNA2D4-218ENST00000585385 976 ntTSL 510.84□□□□□ -0.673e-7■■■□□ 19
NCBP2P52298 CACNA2D4-219ENST00000585708 3273 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.693e-7■■■□□ 19
NCBP2P52298 CACNA2D4-203ENST00000444595 4450 ntTSL 1 (best)9.41□□□□□ -0.93e-7■■■□□ 19
NCBP2P52298 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC9.39□□□□□ -0.913e-7■■■□□ 19
NCBP2P52298 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.953e-7■■■□□ 19
Retrieved 100 of 18,329 protein–RNA pairs in 167 ms