RNA–Protein interactions for RNA: ENST00000381736.7

NUP58-202, Transcript of nucleoporin 58, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUP58, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-202ENST00000381736 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
NUP58-202ENST00000381736 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
NUP58-202ENST00000381736 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
NUP58-202ENST00000381736 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
NUP58-202ENST00000381736 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
NUP58-202ENST00000381736 ABCC9O60706 1549 aa19.61■□□□□ 0.73
NUP58-202ENST00000381736 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
NUP58-202ENST00000381736 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
NUP58-202ENST00000381736 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
NUP58-202ENST00000381736 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
NUP58-202ENST00000381736 NACADO15069 1562 aa18.73■□□□□ 0.59
NUP58-202ENST00000381736 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
NUP58-202ENST00000381736 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
NUP58-202ENST00000381736 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.53
NUP58-202ENST00000381736 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
NUP58-202ENST00000381736 FAM9AQ8IZU1 332 aaPredicted RBP18.35■□□□□ 0.53
NUP58-202ENST00000381736 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
NUP58-202ENST00000381736 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
NUP58-202ENST00000381736 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
NUP58-202ENST00000381736 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
NUP58-202ENST00000381736 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
NUP58-202ENST00000381736 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
NUP58-202ENST00000381736 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.44
NUP58-202ENST00000381736 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
NUP58-202ENST00000381736 LOC105371045A0A1W2PR82 267 aa17.8■□□□□ 0.44
NUP58-202ENST00000381736 APLP2Q06481 763 aa17.71■□□□□ 0.43
NUP58-202ENST00000381736 WIZO95785 1651 aa17.69■□□□□ 0.42
NUP58-202ENST00000381736 SMARCA4P51532 1647 aa17.67■□□□□ 0.42
NUP58-202ENST00000381736 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
NUP58-202ENST00000381736 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
NUP58-202ENST00000381736 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.4
NUP58-202ENST00000381736 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
NUP58-202ENST00000381736 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
NUP58-202ENST00000381736 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
NUP58-202ENST00000381736 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
NUP58-202ENST00000381736 ATP1B4Q9UN42 357 aaPredicted RBP17.49■□□□□ 0.39
NUP58-202ENST00000381736 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
NUP58-202ENST00000381736 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
NUP58-202ENST00000381736 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
NUP58-202ENST00000381736 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
NUP58-202ENST00000381736 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
NUP58-202ENST00000381736 NCAPD3P42695 1498 aa17.33■□□□□ 0.36
NUP58-202ENST00000381736 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
NUP58-202ENST00000381736 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
NUP58-202ENST00000381736 FBLN2P98095 1184 aa17.24■□□□□ 0.35
NUP58-202ENST00000381736 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
NUP58-202ENST00000381736 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
NUP58-202ENST00000381736 EEA1Q15075 1411 aa17.16■□□□□ 0.34
NUP58-202ENST00000381736 ERCC6Q03468 1493 aa17.15■□□□□ 0.34
NUP58-202ENST00000381736 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
NUP58-202ENST00000381736 HMGXB3Q12766 1538 aa17.13■□□□□ 0.33
NUP58-202ENST00000381736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
NUP58-202ENST00000381736 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
NUP58-202ENST00000381736 SOGA1O94964 1423 aa17.11■□□□□ 0.33
NUP58-202ENST00000381736 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
NUP58-202ENST00000381736 P3H3Q8IVL6 736 aa17.08■□□□□ 0.33
NUP58-202ENST00000381736 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
NUP58-202ENST00000381736 FANCD2Q9BXW9 1451 aa17.03■□□□□ 0.32
NUP58-202ENST00000381736 CUX2O14529 1486 aa17.01■□□□□ 0.31
NUP58-202ENST00000381736 GOLGA3Q08378 1498 aa17■□□□□ 0.31
NUP58-202ENST00000381736 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
NUP58-202ENST00000381736 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
NUP58-202ENST00000381736 CFTRP13569 1480 aa16.98■□□□□ 0.31
NUP58-202ENST00000381736 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
NUP58-202ENST00000381736 ITGAEP38570 1179 aa16.96■□□□□ 0.31
NUP58-202ENST00000381736 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
NUP58-202ENST00000381736 NESP48681 1621 aa16.92■□□□□ 0.3
NUP58-202ENST00000381736 CLIP1P30622 1438 aa16.92■□□□□ 0.3
NUP58-202ENST00000381736 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
NUP58-202ENST00000381736 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
NUP58-202ENST00000381736 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
NUP58-202ENST00000381736 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
NUP58-202ENST00000381736 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
NUP58-202ENST00000381736 ARID3CA6NKF2 412 aa16.86■□□□□ 0.29
NUP58-202ENST00000381736 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
NUP58-202ENST00000381736 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
NUP58-202ENST00000381736 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
NUP58-202ENST00000381736 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
NUP58-202ENST00000381736 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
NUP58-202ENST00000381736 CUX1P39880 1505 aa16.71■□□□□ 0.27
NUP58-202ENST00000381736 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
NUP58-202ENST00000381736 LAMC3Q9Y6N6 1575 aa16.7■□□□□ 0.26
NUP58-202ENST00000381736 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
NUP58-202ENST00000381736 CDK11AQ9UQ88 783 aaPredicted RBP16.67■□□□□ 0.26
NUP58-202ENST00000381736 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
NUP58-202ENST00000381736 IGF1RP08069 1367 aa16.65■□□□□ 0.26
NUP58-202ENST00000381736 MYT1LQ9UL68 1186 aa16.64■□□□□ 0.26
NUP58-202ENST00000381736 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
NUP58-202ENST00000381736 HRCP23327 699 aa16.62■□□□□ 0.25
NUP58-202ENST00000381736 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
NUP58-202ENST00000381736 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
NUP58-202ENST00000381736 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
NUP58-202ENST00000381736 MTUS2Q5JR59 1369 aa16.58■□□□□ 0.24
NUP58-202ENST00000381736 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.243e-7■■■□□ 19.2
NUP58-202ENST00000381736 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
NUP58-202ENST00000381736 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
NUP58-202ENST00000381736 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
NUP58-202ENST00000381736 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
NUP58-202ENST00000381736 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
NUP58-202ENST00000381736 NPM1P06748 294 aaKnown RBP eCLIP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms