Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF4P18848 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.5■□□□□ 0.39
ATF4P18848 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATF4P18848 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATF4P18848 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF4P18848 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATF4P18848 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATF4P18848 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF4P18848 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF4P18848 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ATF4P18848 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF4P18848 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
ATF4P18848 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF4P18848 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF4P18848 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.49■□□□□ 0.39
ATF4P18848 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ATF4P18848 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ATF4P18848 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATF4P18848 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.49■□□□□ 0.39
ATF4P18848 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ATF4P18848 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ATF4P18848 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.48■□□□□ 0.39
ATF4P18848 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.48■□□□□ 0.39
ATF4P18848 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.48■□□□□ 0.39
ATF4P18848 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.48■□□□□ 0.39
ATF4P18848 AC019171.1-201ENST00000601251 1056 ntBASIC17.48■□□□□ 0.39
ATF4P18848 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
ATF4P18848 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.48■□□□□ 0.39
ATF4P18848 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.48■□□□□ 0.39
ATF4P18848 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATF4P18848 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 AL022069.1-201ENST00000568025 1636 ntBASIC17.47■□□□□ 0.39
ATF4P18848 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ATF4P18848 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.47■□□□□ 0.39
ATF4P18848 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF4P18848 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATF4P18848 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF4P18848 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.47■□□□□ 0.39
ATF4P18848 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.47■□□□□ 0.39
ATF4P18848 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATF4P18848 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ATF4P18848 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.46■□□□□ 0.39
ATF4P18848 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.46■□□□□ 0.39
ATF4P18848 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ATF4P18848 BX323043.1-201ENST00000641006 1765 ntBASIC17.46■□□□□ 0.39
ATF4P18848 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.46■□□□□ 0.39
ATF4P18848 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 YBX1P4-201ENST00000392794 808 ntBASIC17.46■□□□□ 0.39
ATF4P18848 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 AC011551.1-201ENST00000614101 683 ntBASIC17.46■□□□□ 0.39
ATF4P18848 AL035685.1-201ENST00000636663 812 ntBASIC17.46■□□□□ 0.39
ATF4P18848 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.46■□□□□ 0.39
ATF4P18848 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATF4P18848 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATF4P18848 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATF4P18848 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
ATF4P18848 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATF4P18848 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATF4P18848 LONRF2P2-201ENST00000439212 571 ntBASIC17.45■□□□□ 0.38
ATF4P18848 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms