Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.41■□□□□ 0.7
THBS1P07996 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THBS1P07996 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.41■□□□□ 0.7
THBS1P07996 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
THBS1P07996 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.4■□□□□ 0.7
THBS1P07996 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.4■□□□□ 0.7
THBS1P07996 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS1P07996 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.4■□□□□ 0.7
THBS1P07996 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS1P07996 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS1P07996 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
THBS1P07996 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.4■□□□□ 0.7
THBS1P07996 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
THBS1P07996 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.4■□□□□ 0.7
THBS1P07996 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.4■□□□□ 0.7
THBS1P07996 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.4■□□□□ 0.7
THBS1P07996 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THBS1P07996 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
THBS1P07996 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
THBS1P07996 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.39■□□□□ 0.7
THBS1P07996 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS1P07996 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.39■□□□□ 0.69
THBS1P07996 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
THBS1P07996 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THBS1P07996 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.39■□□□□ 0.69
THBS1P07996 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.39■□□□□ 0.69
THBS1P07996 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.39■□□□□ 0.69
THBS1P07996 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.39■□□□□ 0.69
THBS1P07996 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
THBS1P07996 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.39■□□□□ 0.69
THBS1P07996 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.38■□□□□ 0.69
THBS1P07996 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.38■□□□□ 0.69
THBS1P07996 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 AC105265.2-201ENST00000467189 838 ntBASIC19.38■□□□□ 0.69
THBS1P07996 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.38■□□□□ 0.69
THBS1P07996 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.38■□□□□ 0.69
THBS1P07996 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.38■□□□□ 0.69
THBS1P07996 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THBS1P07996 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.37■□□□□ 0.69
THBS1P07996 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.37■□□□□ 0.69
THBS1P07996 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.37■□□□□ 0.69
THBS1P07996 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.37■□□□□ 0.69
THBS1P07996 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.37■□□□□ 0.69
THBS1P07996 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.37■□□□□ 0.69
THBS1P07996 AL358852.1-201ENST00000623174 1268 ntBASIC19.37■□□□□ 0.69
THBS1P07996 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
THBS1P07996 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THBS1P07996 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
THBS1P07996 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.36■□□□□ 0.69
THBS1P07996 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
THBS1P07996 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.36■□□□□ 0.69
THBS1P07996 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.36■□□□□ 0.69
THBS1P07996 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.36■□□□□ 0.69
THBS1P07996 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.36■□□□□ 0.69
THBS1P07996 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS1P07996 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THBS1P07996 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 TPRG1LP1-201ENST00000598702 760 ntBASIC19.35■□□□□ 0.69
THBS1P07996 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.35■□□□□ 0.69
THBS1P07996 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.35■□□□□ 0.69
THBS1P07996 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
THBS1P07996 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.35■□□□□ 0.69
THBS1P07996 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
THBS1P07996 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.34■□□□□ 0.69
THBS1P07996 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
THBS1P07996 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS1P07996 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
THBS1P07996 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.34■□□□□ 0.69
THBS1P07996 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.34■□□□□ 0.69
THBS1P07996 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.34■□□□□ 0.69
THBS1P07996 AC053503.5-201ENST00000601508 636 ntBASIC19.34■□□□□ 0.69
THBS1P07996 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
THBS1P07996 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
THBS1P07996 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms