Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT6AP02538 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.39■□□□□ 0.86
KRT6AP02538 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT6AP02538 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT6AP02538 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT6AP02538 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT6AP02538 AP001330.3-201ENST00000520123 633 ntBASIC20.39■□□□□ 0.85
KRT6AP02538 AL355001.2-201ENST00000620617 1191 ntBASIC20.39■□□□□ 0.85
KRT6AP02538 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT6AP02538 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT6AP02538 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT6AP02538 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
KRT6AP02538 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT6AP02538 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT6AP02538 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT6AP02538 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT6AP02538 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT6AP02538 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
KRT6AP02538 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT6AP02538 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT6AP02538 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT6AP02538 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT6AP02538 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT6AP02538 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 RASA4CP-201ENST00000424092 1398 ntBASIC20.37■□□□□ 0.85
KRT6AP02538 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT6AP02538 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.37■□□□□ 0.85
KRT6AP02538 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT6AP02538 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.37■□□□□ 0.85
KRT6AP02538 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT6AP02538 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KRT6AP02538 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
KRT6AP02538 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KRT6AP02538 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KRT6AP02538 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRT6AP02538 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KRT6AP02538 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.37■□□□□ 0.85
KRT6AP02538 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT6AP02538 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT6AP02538 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT6AP02538 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT6AP02538 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT6AP02538 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT6AP02538 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.36■□□□□ 0.85
KRT6AP02538 AC110285.6-201ENST00000617652 491 ntBASIC20.36■□□□□ 0.85
KRT6AP02538 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
KRT6AP02538 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT6AP02538 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT6AP02538 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT6AP02538 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KRT6AP02538 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
KRT6AP02538 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT6AP02538 AC091305.1-201ENST00000479476 895 ntBASIC20.35■□□□□ 0.85
KRT6AP02538 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT6AP02538 AF213884.3-201ENST00000563833 479 ntBASIC20.35■□□□□ 0.85
KRT6AP02538 AL049796.1-201ENST00000565336 1766 ntBASIC20.35■□□□□ 0.85
KRT6AP02538 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT6AP02538 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT6AP02538 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT6AP02538 BX005040.4-201ENST00000637145 1518 ntBASIC20.34■□□□□ 0.85
KRT6AP02538 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT6AP02538 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT6AP02538 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
KRT6AP02538 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 MIR572-201ENST00000384983 95 ntBASIC20.34■□□□□ 0.85
KRT6AP02538 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT6AP02538 MIR939-201ENST00000401314 82 ntBASIC20.34■□□□□ 0.85
KRT6AP02538 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT6AP02538 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT6AP02538 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms