Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.48■□□□□ 0.39
SFT2D2O95562 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFT2D2O95562 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SFT2D2O95562 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.47■□□□□ 0.39
SFT2D2O95562 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.47■□□□□ 0.39
SFT2D2O95562 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFT2D2O95562 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.46■□□□□ 0.39
SFT2D2O95562 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFT2D2O95562 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.46■□□□□ 0.39
SFT2D2O95562 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFT2D2O95562 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFT2D2O95562 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFT2D2O95562 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.46■□□□□ 0.39
SFT2D2O95562 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.46■□□□□ 0.39
SFT2D2O95562 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.46■□□□□ 0.39
SFT2D2O95562 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.46■□□□□ 0.39
SFT2D2O95562 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SFT2D2O95562 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.46■□□□□ 0.39
SFT2D2O95562 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SFT2D2O95562 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFT2D2O95562 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SFT2D2O95562 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SFT2D2O95562 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFT2D2O95562 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFT2D2O95562 PLK5-205ENST00000642079 1969 ntBASIC17.46■□□□□ 0.39
SFT2D2O95562 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SFT2D2O95562 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.46■□□□□ 0.38
SFT2D2O95562 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.46■□□□□ 0.38
SFT2D2O95562 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SFT2D2O95562 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.45■□□□□ 0.38
SFT2D2O95562 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.45■□□□□ 0.38
SFT2D2O95562 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SFT2D2O95562 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.45■□□□□ 0.38
SFT2D2O95562 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SFT2D2O95562 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SFT2D2O95562 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFT2D2O95562 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SFT2D2O95562 PCDHAC2-203ENST00000615316 3011 ntBASIC17.45■□□□□ 0.38
SFT2D2O95562 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SFT2D2O95562 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.44■□□□□ 0.38
SFT2D2O95562 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.44■□□□□ 0.38
SFT2D2O95562 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.44■□□□□ 0.38
SFT2D2O95562 AC004987.1-201ENST00000428627 508 ntBASIC17.44■□□□□ 0.38
SFT2D2O95562 ATP5G2P3-201ENST00000429083 425 ntBASIC17.44■□□□□ 0.38
SFT2D2O95562 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.44■□□□□ 0.38
SFT2D2O95562 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.44■□□□□ 0.38
SFT2D2O95562 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SFT2D2O95562 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.44■□□□□ 0.38
SFT2D2O95562 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.43■□□□□ 0.38
SFT2D2O95562 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.43■□□□□ 0.38
SFT2D2O95562 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.43■□□□□ 0.38
SFT2D2O95562 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SFT2D2O95562 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.43■□□□□ 0.38
SFT2D2O95562 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SFT2D2O95562 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
SFT2D2O95562 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.43■□□□□ 0.38
SFT2D2O95562 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.43■□□□□ 0.38
SFT2D2O95562 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SFT2D2O95562 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms