Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDRT1O95170 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDRT1O95170 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDRT1O95170 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDRT1O95170 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDRT1O95170 KRT125P-201ENST00000546827 989 ntBASIC18.75■□□□□ 0.59
CDRT1O95170 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.75■□□□□ 0.59
CDRT1O95170 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDRT1O95170 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CDRT1O95170 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDRT1O95170 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDRT1O95170 AP005212.1-201ENST00000581547 1997 ntBASIC18.75■□□□□ 0.59
CDRT1O95170 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.75■□□□□ 0.59
CDRT1O95170 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDRT1O95170 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDRT1O95170 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDRT1O95170 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.74■□□□□ 0.59
CDRT1O95170 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.74■□□□□ 0.59
CDRT1O95170 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDRT1O95170 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.74■□□□□ 0.59
CDRT1O95170 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.74■□□□□ 0.59
CDRT1O95170 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 MTDHP2-201ENST00000601468 714 ntBASIC18.74■□□□□ 0.59
CDRT1O95170 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.74■□□□□ 0.59
CDRT1O95170 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.74■□□□□ 0.59
CDRT1O95170 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDRT1O95170 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDRT1O95170 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDRT1O95170 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDRT1O95170 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDRT1O95170 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDRT1O95170 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDRT1O95170 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.73■□□□□ 0.59
CDRT1O95170 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDRT1O95170 AC073314.1-201ENST00000568729 2216 ntBASIC18.73■□□□□ 0.59
CDRT1O95170 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDRT1O95170 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.73■□□□□ 0.59
CDRT1O95170 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDRT1O95170 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.72■□□□□ 0.59
CDRT1O95170 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.72■□□□□ 0.59
CDRT1O95170 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.72■□□□□ 0.59
CDRT1O95170 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
CDRT1O95170 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.72■□□□□ 0.59
CDRT1O95170 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDRT1O95170 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.72■□□□□ 0.59
CDRT1O95170 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDRT1O95170 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.72■□□□□ 0.59
CDRT1O95170 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.72■□□□□ 0.59
CDRT1O95170 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT1O95170 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT1O95170 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT1O95170 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDRT1O95170 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CDRT1O95170 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT1O95170 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT1O95170 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT1O95170 MIR4787-201ENST00000607364 84 ntBASIC18.71■□□□□ 0.59
CDRT1O95170 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT1O95170 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.71■□□□□ 0.59
CDRT1O95170 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDRT1O95170 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDRT1O95170 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.7■□□□□ 0.58
CDRT1O95170 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDRT1O95170 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.7■□□□□ 0.58
CDRT1O95170 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.7■□□□□ 0.58
CDRT1O95170 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT1O95170 Z92544.1-202ENST00000571933 1220 ntBASIC18.7■□□□□ 0.58
CDRT1O95170 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.7■□□□□ 0.58
CDRT1O95170 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms