Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.92■□□□□ 0.62
PFDN1O60925 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.92■□□□□ 0.62
PFDN1O60925 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PFDN1O60925 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.92■□□□□ 0.62
PFDN1O60925 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 NOC2LP1-202ENST00000452600 2235 ntBASIC18.92■□□□□ 0.62
PFDN1O60925 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PFDN1O60925 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.91■□□□□ 0.62
PFDN1O60925 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PFDN1O60925 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PFDN1O60925 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PFDN1O60925 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PFDN1O60925 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
PFDN1O60925 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PFDN1O60925 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PFDN1O60925 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.9■□□□□ 0.62
PFDN1O60925 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PFDN1O60925 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
PFDN1O60925 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PFDN1O60925 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PFDN1O60925 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.9■□□□□ 0.62
PFDN1O60925 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PFDN1O60925 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PFDN1O60925 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.9■□□□□ 0.62
PFDN1O60925 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.9■□□□□ 0.62
PFDN1O60925 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PFDN1O60925 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PFDN1O60925 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PFDN1O60925 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.9■□□□□ 0.62
PFDN1O60925 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PFDN1O60925 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PFDN1O60925 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.9■□□□□ 0.62
PFDN1O60925 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PFDN1O60925 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.89■□□□□ 0.61
PFDN1O60925 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
PFDN1O60925 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.89■□□□□ 0.61
PFDN1O60925 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PFDN1O60925 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PFDN1O60925 AP005212.1-201ENST00000581547 1997 ntBASIC18.89■□□□□ 0.61
PFDN1O60925 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PFDN1O60925 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.89■□□□□ 0.61
PFDN1O60925 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PFDN1O60925 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.89■□□□□ 0.61
PFDN1O60925 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PFDN1O60925 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.89■□□□□ 0.61
PFDN1O60925 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PFDN1O60925 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PFDN1O60925 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.88■□□□□ 0.61
PFDN1O60925 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 AC108673.1-201ENST00000510422 1159 ntBASIC18.88■□□□□ 0.61
PFDN1O60925 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PFDN1O60925 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PFDN1O60925 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.88■□□□□ 0.61
PFDN1O60925 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.88■□□□□ 0.61
PFDN1O60925 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PFDN1O60925 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PFDN1O60925 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PFDN1O60925 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PFDN1O60925 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PFDN1O60925 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms