Protein–RNA interactions for Protein: O60291

MGRN1, E3 ubiquitin-protein ligase MGRN1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MGRN1O60291 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MGRN1O60291 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MGRN1O60291 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
MGRN1O60291 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MGRN1O60291 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MGRN1O60291 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
MGRN1O60291 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.54■□□□□ 0.88
MGRN1O60291 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
MGRN1O60291 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.54■□□□□ 0.88
MGRN1O60291 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MGRN1O60291 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MGRN1O60291 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.53■□□□□ 0.88
MGRN1O60291 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.53■□□□□ 0.88
MGRN1O60291 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.53■□□□□ 0.88
MGRN1O60291 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MGRN1O60291 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MGRN1O60291 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MGRN1O60291 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MGRN1O60291 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.53■□□□□ 0.88
MGRN1O60291 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MGRN1O60291 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.52■□□□□ 0.88
MGRN1O60291 AC116562.4-201ENST00000641316 2276 ntBASIC20.52■□□□□ 0.88
MGRN1O60291 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MGRN1O60291 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MGRN1O60291 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MGRN1O60291 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MGRN1O60291 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MGRN1O60291 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.52■□□□□ 0.88
MGRN1O60291 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
MGRN1O60291 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.52■□□□□ 0.88
MGRN1O60291 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.52■□□□□ 0.88
MGRN1O60291 MIR4508-201ENST00000584178 70 ntBASIC20.52■□□□□ 0.88
MGRN1O60291 PVT1_1.1-201ENST00000615125 194 ntBASIC20.52■□□□□ 0.88
MGRN1O60291 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MGRN1O60291 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MGRN1O60291 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.52■□□□□ 0.88
MGRN1O60291 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
MGRN1O60291 C17orf82-201ENST00000623772 1530 ntBASIC20.52■□□□□ 0.87
MGRN1O60291 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MGRN1O60291 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 AP000974.1-201ENST00000623909 2387 ntBASIC20.51■□□□□ 0.87
MGRN1O60291 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 AC026471.6-201ENST00000622954 1905 ntBASIC20.51■□□□□ 0.87
MGRN1O60291 AC112907.3-201ENST00000577781 2400 ntBASIC20.51■□□□□ 0.87
MGRN1O60291 AC004408.2-201ENST00000623613 2777 ntBASIC20.51■□□□□ 0.87
MGRN1O60291 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.51■□□□□ 0.87
MGRN1O60291 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.51■□□□□ 0.87
MGRN1O60291 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MGRN1O60291 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MGRN1O60291 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.5■□□□□ 0.87
MGRN1O60291 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 KRT18P24-201ENST00000344739 1156 ntBASIC20.5■□□□□ 0.87
MGRN1O60291 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MGRN1O60291 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.5■□□□□ 0.87
MGRN1O60291 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 AC006128.1-201ENST00000624704 1661 ntBASIC20.5■□□□□ 0.87
MGRN1O60291 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.5■□□□□ 0.87
MGRN1O60291 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.5■□□□□ 0.87
MGRN1O60291 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.5■□□□□ 0.87
MGRN1O60291 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.5■□□□□ 0.87
MGRN1O60291 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MGRN1O60291 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
MGRN1O60291 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MGRN1O60291 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MGRN1O60291 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MGRN1O60291 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
MGRN1O60291 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MGRN1O60291 AC104564.3-201ENST00000582367 638 ntBASIC20.49■□□□□ 0.87
MGRN1O60291 AC010980.1-201ENST00000587192 1142 ntBASIC20.49■□□□□ 0.87
MGRN1O60291 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.49■□□□□ 0.87
MGRN1O60291 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.49■□□□□ 0.87
MGRN1O60291 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.49■□□□□ 0.87
MGRN1O60291 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MGRN1O60291 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MGRN1O60291 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
MGRN1O60291 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms