Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TNPO3Q9Y5L0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TNPO3Q9Y5L0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.59■□□□□ 0.89
TNPO3Q9Y5L0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 MIR572-201ENST00000384983 95 ntBASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 MIR939-201ENST00000401314 82 ntBASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 AC091305.1-201ENST00000479476 895 ntBASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.58■□□□□ 0.89
TNPO3Q9Y5L0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNPO3Q9Y5L0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNPO3Q9Y5L0 AC055733.4-201ENST00000638462 1354 ntBASIC20.58■□□□□ 0.88
TNPO3Q9Y5L0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.58■□□□□ 0.88
TNPO3Q9Y5L0 BX005040.4-201ENST00000637145 1518 ntBASIC20.58■□□□□ 0.88
TNPO3Q9Y5L0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNPO3Q9Y5L0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 AL049796.1-201ENST00000565336 1766 ntBASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 AC110285.6-201ENST00000617652 491 ntBASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.57■□□□□ 0.88
TNPO3Q9Y5L0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 AC005224.4-201ENST00000583262 1652 ntBASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNPO3Q9Y5L0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.55■□□□□ 0.88
TNPO3Q9Y5L0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO3Q9Y5L0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.55■□□□□ 0.88
TNPO3Q9Y5L0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TNPO3Q9Y5L0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms