Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 AL049796.1-201ENST00000565336 1766 ntBASIC19.88■□□□□ 0.77
SLC47A1Q96FL8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 MIR3181-201ENST00000578512 73 ntBASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SLC47A1Q96FL8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC47A1Q96FL8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.85■□□□□ 0.77
SLC47A1Q96FL8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC47A1Q96FL8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC47A1Q96FL8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms