Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 CR559946.2-201ENST00000623684 991 ntBASIC14.31□□□□□ -0.12
COPS9Q8WXC6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 LINC01529-204ENST00000636474 1715 ntBASIC14.31□□□□□ -0.12
COPS9Q8WXC6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.31□□□□□ -0.12
COPS9Q8WXC6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 CROCCP1-201ENST00000426910 5675 ntBASIC14.3□□□□□ -0.12
COPS9Q8WXC6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 AC018755.3-202ENST00000596210 929 ntBASIC14.3□□□□□ -0.12
COPS9Q8WXC6 CA15P2-201ENST00000611168 834 ntBASIC14.3□□□□□ -0.12
COPS9Q8WXC6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
COPS9Q8WXC6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 FP325331.1-202ENST00000623531 1380 ntBASIC14.29□□□□□ -0.12
COPS9Q8WXC6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS9Q8WXC6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 RNF165-205ENST00000588679 2904 ntBASIC14.28□□□□□ -0.12
COPS9Q8WXC6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 AF106564.1-201ENST00000607058 2553 ntBASIC14.28□□□□□ -0.12
COPS9Q8WXC6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COPS9Q8WXC6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COPS9Q8WXC6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms