Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SVIPQ8NHG7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SVIPQ8NHG7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC13.4□□□□□ -0.27
SVIPQ8NHG7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
SVIPQ8NHG7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SVIPQ8NHG7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SVIPQ8NHG7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 PCDHA12-202ENST00000613593 2588 ntBASIC13.38□□□□□ -0.27
SVIPQ8NHG7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SVIPQ8NHG7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 LINC00538-201ENST00000626109 1906 ntBASIC13.37□□□□□ -0.27
SVIPQ8NHG7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SVIPQ8NHG7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms