Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PJA1Q8NG27 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 AC091874.3-201ENST00000512672 1195 ntBASIC21.72■■□□□ 1.07
PJA1Q8NG27 AC079089.2-201ENST00000531211 1277 ntBASIC21.72■■□□□ 1.07
PJA1Q8NG27 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.72■■□□□ 1.07
PJA1Q8NG27 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.72■■□□□ 1.07
PJA1Q8NG27 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.72■■□□□ 1.07
PJA1Q8NG27 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.72■■□□□ 1.07
PJA1Q8NG27 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.72■■□□□ 1.07
PJA1Q8NG27 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PJA1Q8NG27 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.72■■□□□ 1.07
PJA1Q8NG27 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 UNC93B4-201ENST00000505679 747 ntBASIC21.71■■□□□ 1.07
PJA1Q8NG27 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 AC053503.5-201ENST00000601508 636 ntBASIC21.71■■□□□ 1.07
PJA1Q8NG27 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PJA1Q8NG27 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PJA1Q8NG27 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PJA1Q8NG27 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PJA1Q8NG27 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.7■■□□□ 1.06
PJA1Q8NG27 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PJA1Q8NG27 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.7■■□□□ 1.06
PJA1Q8NG27 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.7■■□□□ 1.06
PJA1Q8NG27 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.7■■□□□ 1.06
PJA1Q8NG27 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.7■■□□□ 1.06
PJA1Q8NG27 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.7■■□□□ 1.06
PJA1Q8NG27 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PJA1Q8NG27 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.7■■□□□ 1.06
PJA1Q8NG27 ABCB10P4-201ENST00000566803 2184 ntBASIC21.7■■□□□ 1.06
PJA1Q8NG27 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.69■■□□□ 1.06
PJA1Q8NG27 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PJA1Q8NG27 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PJA1Q8NG27 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.69■■□□□ 1.06
PJA1Q8NG27 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PJA1Q8NG27 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.69■■□□□ 1.06
PJA1Q8NG27 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PJA1Q8NG27 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.69■■□□□ 1.06
PJA1Q8NG27 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.68■■□□□ 1.06
PJA1Q8NG27 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PJA1Q8NG27 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PJA1Q8NG27 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms