Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 OR2I1P-207ENST00000453522 948 ntBASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.21■□□□□ 0.66
TMEM53Q6P2H8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 MIR4767-201ENST00000582827 78 ntBASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM53Q6P2H8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 AC106739.1-201ENST00000617035 715 ntBASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM53Q6P2H8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 AL139246.5-201ENST00000606645 996 ntBASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM53Q6P2H8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 ESRRAP2-201ENST00000418437 1549 ntBASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 AC110285.6-201ENST00000617652 491 ntBASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 AC068587.7-201ENST00000641602 218 ntBASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 LINC01960-201ENST00000563759 1884 ntBASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM53Q6P2H8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 AC087239.1-201ENST00000622671 572 ntBASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM53Q6P2H8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms