Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LPCAT4Q643R3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.91■□□□□ 0.78
LPCAT4Q643R3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.91■□□□□ 0.78
LPCAT4Q643R3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 MIR4281-201ENST00000580852 62 ntBASIC19.9■□□□□ 0.78
LPCAT4Q643R3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LPCAT4Q643R3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
LPCAT4Q643R3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LPCAT4Q643R3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 AC027702.1-201ENST00000563810 1770 ntBASIC19.89■□□□□ 0.77
LPCAT4Q643R3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 AC019171.1-201ENST00000601251 1056 ntBASIC19.89■□□□□ 0.77
LPCAT4Q643R3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LPCAT4Q643R3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 PLK5-205ENST00000642079 1969 ntBASIC19.88■□□□□ 0.77
LPCAT4Q643R3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LPCAT4Q643R3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 SMG8-203ENST00000578922 2178 ntBASIC19.87■□□□□ 0.77
LPCAT4Q643R3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LPCAT4Q643R3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms