Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 AC026471.6-201ENST00000622954 1905 ntBASIC16.69■□□□□ 0.26
FAM78BQ5VT40 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 AC010997.5-201ENST00000609182 354 ntBASIC16.69■□□□□ 0.26
FAM78BQ5VT40 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FAM78BQ5VT40 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 C17orf82-201ENST00000623772 1530 ntBASIC16.68■□□□□ 0.26
FAM78BQ5VT40 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
FAM78BQ5VT40 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 AL035685.1-201ENST00000636663 812 ntBASIC16.67■□□□□ 0.26
FAM78BQ5VT40 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.67■□□□□ 0.26
FAM78BQ5VT40 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 AC079089.2-201ENST00000531211 1277 ntBASIC16.66■□□□□ 0.26
FAM78BQ5VT40 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FAM78BQ5VT40 LINC01006-201ENST00000333319 2292 ntBASIC16.66■□□□□ 0.26
FAM78BQ5VT40 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
FAM78BQ5VT40 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms