Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.26■□□□□ 0.67
CXCR4P61073 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.26■□□□□ 0.67
CXCR4P61073 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CXCR4P61073 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CXCR4P61073 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.25■□□□□ 0.67
CXCR4P61073 AL031602.1-201ENST00000633169 911 ntBASIC19.25■□□□□ 0.67
CXCR4P61073 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CXCR4P61073 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.25■□□□□ 0.67
CXCR4P61073 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
CXCR4P61073 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CXCR4P61073 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.25■□□□□ 0.67
CXCR4P61073 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CXCR4P61073 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CXCR4P61073 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CXCR4P61073 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.24■□□□□ 0.67
CXCR4P61073 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CXCR4P61073 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.24■□□□□ 0.67
CXCR4P61073 AC010997.5-201ENST00000609182 354 ntBASIC19.24■□□□□ 0.67
CXCR4P61073 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.24■□□□□ 0.67
CXCR4P61073 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CXCR4P61073 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.24■□□□□ 0.67
CXCR4P61073 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.24■□□□□ 0.67
CXCR4P61073 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.24■□□□□ 0.67
CXCR4P61073 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
CXCR4P61073 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CXCR4P61073 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.23■□□□□ 0.67
CXCR4P61073 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CXCR4P61073 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.23■□□□□ 0.67
CXCR4P61073 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCR4P61073 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.23■□□□□ 0.67
CXCR4P61073 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CXCR4P61073 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CXCR4P61073 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCR4P61073 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCR4P61073 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.22■□□□□ 0.67
CXCR4P61073 AL499627.2-201ENST00000606283 725 ntBASIC19.22■□□□□ 0.67
CXCR4P61073 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.22■□□□□ 0.67
CXCR4P61073 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCR4P61073 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.22■□□□□ 0.67
CXCR4P61073 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CXCR4P61073 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CXCR4P61073 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CXCR4P61073 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CXCR4P61073 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.21■□□□□ 0.67
CXCR4P61073 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 TSPY9P-201ENST00000440215 945 ntBASIC19.21■□□□□ 0.67
CXCR4P61073 TSPY11P-201ENST00000442607 1045 ntBASIC19.21■□□□□ 0.67
CXCR4P61073 AC239859.2-201ENST00000444165 318 ntBASIC19.21■□□□□ 0.67
CXCR4P61073 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.21■□□□□ 0.67
CXCR4P61073 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CXCR4P61073 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.21■□□□□ 0.67
CXCR4P61073 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CXCR4P61073 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms