Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MMP8P22894 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.3■■□□□ 1.16
MMP8P22894 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.3■■□□□ 1.16
MMP8P22894 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
MMP8P22894 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP8P22894 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.29■■□□□ 1.16
MMP8P22894 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.29■■□□□ 1.16
MMP8P22894 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.29■■□□□ 1.16
MMP8P22894 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
MMP8P22894 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.29■■□□□ 1.16
MMP8P22894 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.29■■□□□ 1.16
MMP8P22894 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
MMP8P22894 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.29■■□□□ 1.16
MMP8P22894 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP8P22894 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
MMP8P22894 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MMP8P22894 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP8P22894 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP8P22894 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP8P22894 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP8P22894 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MMP8P22894 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
MMP8P22894 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MMP8P22894 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP8P22894 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.28■■□□□ 1.16
MMP8P22894 EEF1DP3-203ENST00000566025 782 ntBASIC22.28■■□□□ 1.16
MMP8P22894 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.28■■□□□ 1.16
MMP8P22894 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP8P22894 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
MMP8P22894 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP8P22894 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP8P22894 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP8P22894 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
MMP8P22894 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP8P22894 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MMP8P22894 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP8P22894 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP8P22894 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
MMP8P22894 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP8P22894 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.27■■□□□ 1.16
MMP8P22894 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.27■■□□□ 1.16
MMP8P22894 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
MMP8P22894 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.27■■□□□ 1.16
MMP8P22894 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP8P22894 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.26■■□□□ 1.15
MMP8P22894 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MMP8P22894 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.26■■□□□ 1.15
MMP8P22894 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
MMP8P22894 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 AC053503.5-201ENST00000601508 636 ntBASIC22.26■■□□□ 1.15
MMP8P22894 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP8P22894 LINC02228-203ENST00000641970 1355 ntBASIC22.25■■□□□ 1.15
MMP8P22894 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP8P22894 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP8P22894 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP8P22894 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.25■■□□□ 1.15
MMP8P22894 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
MMP8P22894 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP8P22894 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP8P22894 AC123595.1-201ENST00000440769 1046 ntBASIC22.25■■□□□ 1.15
MMP8P22894 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP8P22894 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP8P22894 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP8P22894 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.25■■□□□ 1.15
MMP8P22894 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.25■■□□□ 1.15
MMP8P22894 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MMP8P22894 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
MMP8P22894 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
MMP8P22894 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 AC079140.4-201ENST00000507448 529 ntBASIC22.24■■□□□ 1.15
MMP8P22894 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.24■■□□□ 1.15
MMP8P22894 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.24■■□□□ 1.15
MMP8P22894 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.24■■□□□ 1.15
MMP8P22894 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
MMP8P22894 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.24■■□□□ 1.15
MMP8P22894 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms