Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPSAP08865 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPSAP08865 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RPSAP08865 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RPSAP08865 AC073314.1-201ENST00000568729 2216 ntBASIC20.33■□□□□ 0.84
RPSAP08865 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.32■□□□□ 0.84
RPSAP08865 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
RPSAP08865 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RPSAP08865 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.32■□□□□ 0.84
RPSAP08865 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.32■□□□□ 0.84
RPSAP08865 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RPSAP08865 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.32■□□□□ 0.84
RPSAP08865 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.32■□□□□ 0.84
RPSAP08865 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPSAP08865 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.31■□□□□ 0.84
RPSAP08865 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.31■□□□□ 0.84
RPSAP08865 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RPSAP08865 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.31■□□□□ 0.84
RPSAP08865 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.31■□□□□ 0.84
RPSAP08865 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.31■□□□□ 0.84
RPSAP08865 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPSAP08865 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 AP000974.1-201ENST00000623909 2387 ntBASIC20.3■□□□□ 0.84
RPSAP08865 FZD10-202ENST00000539839 3282 ntBASIC20.3■□□□□ 0.84
RPSAP08865 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.3■□□□□ 0.84
RPSAP08865 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RPSAP08865 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.3■□□□□ 0.84
RPSAP08865 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.3■□□□□ 0.84
RPSAP08865 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPSAP08865 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RPSAP08865 NEFHP1-201ENST00000412845 2629 ntBASIC20.29■□□□□ 0.84
RPSAP08865 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.29■□□□□ 0.84
RPSAP08865 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.29■□□□□ 0.84
RPSAP08865 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.29■□□□□ 0.84
RPSAP08865 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.29■□□□□ 0.84
RPSAP08865 RAP2CP1-202ENST00000605179 643 ntBASIC20.29■□□□□ 0.84
RPSAP08865 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPSAP08865 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPSAP08865 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPSAP08865 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.28■□□□□ 0.84
RPSAP08865 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RPSAP08865 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.28■□□□□ 0.84
RPSAP08865 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RPSAP08865 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.28■□□□□ 0.84
RPSAP08865 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RPSAP08865 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RPSAP08865 MIR7108-201ENST00000614319 87 ntBASIC20.28■□□□□ 0.84
RPSAP08865 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPSAP08865 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms