Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
OPN1SWP03999 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
OPN1SWP03999 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
OPN1SWP03999 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.71■□□□□ 0.75
OPN1SWP03999 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.71■□□□□ 0.75
OPN1SWP03999 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.71■□□□□ 0.75
OPN1SWP03999 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
OPN1SWP03999 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
OPN1SWP03999 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.71■□□□□ 0.75
OPN1SWP03999 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
OPN1SWP03999 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.71■□□□□ 0.75
OPN1SWP03999 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
OPN1SWP03999 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
OPN1SWP03999 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.7■□□□□ 0.74
OPN1SWP03999 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.7■□□□□ 0.74
OPN1SWP03999 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.7■□□□□ 0.74
OPN1SWP03999 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
OPN1SWP03999 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.7■□□□□ 0.74
OPN1SWP03999 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.7■□□□□ 0.74
OPN1SWP03999 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 AP005435.1-201ENST00000529293 1178 ntBASIC19.7■□□□□ 0.74
OPN1SWP03999 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.7■□□□□ 0.74
OPN1SWP03999 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.7■□□□□ 0.74
OPN1SWP03999 AL049796.1-201ENST00000565336 1766 ntBASIC19.7■□□□□ 0.74
OPN1SWP03999 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
OPN1SWP03999 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
OPN1SWP03999 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
OPN1SWP03999 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.69■□□□□ 0.74
OPN1SWP03999 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 AP006587.3-201ENST00000525742 1516 ntBASIC19.69■□□□□ 0.74
OPN1SWP03999 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
OPN1SWP03999 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.69■□□□□ 0.74
OPN1SWP03999 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN1SWP03999 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
OPN1SWP03999 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
OPN1SWP03999 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
OPN1SWP03999 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
OPN1SWP03999 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
OPN1SWP03999 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
OPN1SWP03999 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.68■□□□□ 0.74
OPN1SWP03999 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.68■□□□□ 0.74
OPN1SWP03999 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN1SWP03999 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
OPN1SWP03999 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.67■□□□□ 0.74
OPN1SWP03999 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.67■□□□□ 0.74
OPN1SWP03999 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
OPN1SWP03999 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.67■□□□□ 0.74
OPN1SWP03999 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN1SWP03999 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.66■□□□□ 0.74
OPN1SWP03999 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.66■□□□□ 0.74
OPN1SWP03999 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.66■□□□□ 0.74
OPN1SWP03999 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.66■□□□□ 0.74
OPN1SWP03999 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN1SWP03999 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms