Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
IFNA1P01562 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IFNA1P01562 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
IFNA1P01562 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 RPS2P35-201ENST00000443417 897 ntBASIC16.73■□□□□ 0.27
IFNA1P01562 AC004448.1-201ENST00000458332 883 ntBASIC16.73■□□□□ 0.27
IFNA1P01562 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.73■□□□□ 0.27
IFNA1P01562 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.73■□□□□ 0.27
IFNA1P01562 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
IFNA1P01562 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFNA1P01562 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
IFNA1P01562 FP325331.1-202ENST00000623531 1380 ntBASIC16.73■□□□□ 0.27
IFNA1P01562 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.73■□□□□ 0.27
IFNA1P01562 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
IFNA1P01562 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
IFNA1P01562 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
IFNA1P01562 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.72■□□□□ 0.27
IFNA1P01562 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.72■□□□□ 0.27
IFNA1P01562 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
IFNA1P01562 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IFNA1P01562 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.72■□□□□ 0.27
IFNA1P01562 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.72■□□□□ 0.27
IFNA1P01562 AC016575.1-201ENST00000607026 382 ntBASIC16.72■□□□□ 0.27
IFNA1P01562 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.72■□□□□ 0.27
IFNA1P01562 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IFNA1P01562 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFNA1P01562 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IFNA1P01562 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IFNA1P01562 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.72■□□□□ 0.27
IFNA1P01562 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
IFNA1P01562 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
IFNA1P01562 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.71■□□□□ 0.27
IFNA1P01562 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.71■□□□□ 0.27
IFNA1P01562 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.71■□□□□ 0.27
IFNA1P01562 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IFNA1P01562 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.71■□□□□ 0.27
IFNA1P01562 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IFNA1P01562 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFNA1P01562 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.71■□□□□ 0.27
IFNA1P01562 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
IFNA1P01562 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.7■□□□□ 0.26
IFNA1P01562 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
IFNA1P01562 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.7■□□□□ 0.26
IFNA1P01562 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.7■□□□□ 0.26
IFNA1P01562 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 AC133552.2-201ENST00000619106 1032 ntBASIC16.7■□□□□ 0.26
IFNA1P01562 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.7■□□□□ 0.26
IFNA1P01562 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
IFNA1P01562 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.7■□□□□ 0.26
IFNA1P01562 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
IFNA1P01562 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
IFNA1P01562 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.69■□□□□ 0.26
IFNA1P01562 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFNA1P01562 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.69■□□□□ 0.26
IFNA1P01562 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms