Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AIRN-201ENST00000601203 4374 ntBASIC18.97■□□□□ 0.63
PFDN1O60925 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.97■□□□□ 0.63
PFDN1O60925 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PFDN1O60925 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.97■□□□□ 0.63
PFDN1O60925 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PFDN1O60925 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PFDN1O60925 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.97■□□□□ 0.63
PFDN1O60925 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PFDN1O60925 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.96■□□□□ 0.63
PFDN1O60925 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PFDN1O60925 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.96■□□□□ 0.63
PFDN1O60925 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.96■□□□□ 0.63
PFDN1O60925 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.96■□□□□ 0.63
PFDN1O60925 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.96■□□□□ 0.63
PFDN1O60925 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PFDN1O60925 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PFDN1O60925 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PFDN1O60925 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PFDN1O60925 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.95■□□□□ 0.62
PFDN1O60925 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
PFDN1O60925 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.95■□□□□ 0.62
PFDN1O60925 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.95■□□□□ 0.62
PFDN1O60925 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PFDN1O60925 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.95■□□□□ 0.62
PFDN1O60925 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.95■□□□□ 0.62
PFDN1O60925 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PFDN1O60925 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PFDN1O60925 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.94■□□□□ 0.62
PFDN1O60925 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 AC007613.1-201ENST00000572811 2597 ntBASIC18.94■□□□□ 0.62
PFDN1O60925 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.94■□□□□ 0.62
PFDN1O60925 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PFDN1O60925 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.93■□□□□ 0.62
PFDN1O60925 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.93■□□□□ 0.62
PFDN1O60925 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
PFDN1O60925 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.93■□□□□ 0.62
PFDN1O60925 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 AC116562.4-201ENST00000641316 2276 ntBASIC18.93■□□□□ 0.62
PFDN1O60925 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 AC087742.1-201ENST00000575880 1738 ntBASIC18.93■□□□□ 0.62
PFDN1O60925 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PFDN1O60925 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PFDN1O60925 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.92■□□□□ 0.62
PFDN1O60925 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PFDN1O60925 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms