Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TSR3Q9UJK0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21■□□□□ 0.95
TSR3Q9UJK0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21■□□□□ 0.95
TSR3Q9UJK0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21■□□□□ 0.95
TSR3Q9UJK0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TSR3Q9UJK0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21■□□□□ 0.95
TSR3Q9UJK0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21■□□□□ 0.95
TSR3Q9UJK0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 AC012414.1-201ENST00000556676 535 ntBASIC20.99■□□□□ 0.95
TSR3Q9UJK0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.99■□□□□ 0.95
TSR3Q9UJK0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 ZNRF2P3-201ENST00000424200 374 ntBASIC20.98■□□□□ 0.95
TSR3Q9UJK0 AL034346.1-201ENST00000568244 1277 ntBASIC20.98■□□□□ 0.95
TSR3Q9UJK0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 AP006587.3-201ENST00000525742 1516 ntBASIC20.98■□□□□ 0.95
TSR3Q9UJK0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.98■□□□□ 0.95
TSR3Q9UJK0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.97■□□□□ 0.95
TSR3Q9UJK0 IRS3P-201ENST00000223076 1006 ntBASIC20.97■□□□□ 0.95
TSR3Q9UJK0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.97■□□□□ 0.95
TSR3Q9UJK0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSR3Q9UJK0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 AC003102.1-202ENST00000563394 1796 ntBASIC20.96■□□□□ 0.95
TSR3Q9UJK0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSR3Q9UJK0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TSR3Q9UJK0 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms