Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 KRT16P3-201ENST00000439127 1283 ntBASIC18.15■□□□□ 0.5
NICN1Q9BSH3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 MIR3181-201ENST00000578512 73 ntBASIC18.15■□□□□ 0.5
NICN1Q9BSH3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
NICN1Q9BSH3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.14■□□□□ 0.5
NICN1Q9BSH3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NICN1Q9BSH3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NICN1Q9BSH3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 OR2I1P-207ENST00000453522 948 ntBASIC18.13■□□□□ 0.49
NICN1Q9BSH3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 AC068587.7-201ENST00000641602 218 ntBASIC18.13■□□□□ 0.49
NICN1Q9BSH3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NICN1Q9BSH3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 AC010525.1-201ENST00000585559 441 ntBASIC18.12■□□□□ 0.49
NICN1Q9BSH3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.12■□□□□ 0.49
NICN1Q9BSH3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 AC087239.1-201ENST00000622671 572 ntBASIC18.11■□□□□ 0.49
NICN1Q9BSH3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.11■□□□□ 0.49
NICN1Q9BSH3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NICN1Q9BSH3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.1■□□□□ 0.49
NICN1Q9BSH3 LINC01521-201ENST00000504184 1943 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms