Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 AC096631.2-201ENST00000436136 790 ntBASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 AL136162.1-201ENST00000607711 1078 ntBASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM53Q6P2H8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM53Q6P2H8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM53Q6P2H8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM53Q6P2H8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 AC136469.2-201ENST00000623944 1028 ntBASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM53Q6P2H8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM53Q6P2H8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 AC135279.3-201ENST00000610945 1311 ntBASIC19.24■□□□□ 0.67
TMEM53Q6P2H8 AC242852.2-201ENST00000615738 1807 ntBASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM53Q6P2H8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 PBX2P1-201ENST00000493219 1291 ntBASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 AC024257.2-201ENST00000549699 147 ntBASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM53Q6P2H8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM53Q6P2H8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms