Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 TERF1P5-201ENST00000477545 1207 ntBASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
PRPF40BQ6NWY9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.64■■□□□ 1.85
PRPF40BQ6NWY9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
PRPF40BQ6NWY9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PRPF40BQ6NWY9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 RPS2P52-201ENST00000469610 820 ntBASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.63■■□□□ 1.85
PRPF40BQ6NWY9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 SLC7A5P1-201ENST00000568957 537 ntBASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.62■■□□□ 1.85
PRPF40BQ6NWY9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PRPF40BQ6NWY9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 AC098590.1-201ENST00000468126 897 ntBASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
PRPF40BQ6NWY9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 AC093787.1-201ENST00000450396 207 ntBASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 AC092118.2-201ENST00000613495 667 ntBASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PRPF40BQ6NWY9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 RARRES2P4-201ENST00000514074 484 ntBASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PRPF40BQ6NWY9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
PRPF40BQ6NWY9 AC233723.2-201ENST00000623798 2106 ntBASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 AC007322.4-201ENST00000509611 723 ntBASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 OR10C1-204ENST00000622521 1039 ntBASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.57■■□□□ 1.84
PRPF40BQ6NWY9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms