Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRTCAP3Q53RY4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRTCAP3Q53RY4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 AL591742.1-201ENST00000604433 565 ntBASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
KRTCAP3Q53RY4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 AC092118.2-201ENST00000613495 667 ntBASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRTCAP3Q53RY4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 AC243732.1-201ENST00000612648 864 ntBASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 AC139530.1-201ENST00000575312 1977 ntBASIC19.02■□□□□ 0.64
KRTCAP3Q53RY4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRTCAP3Q53RY4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRTCAP3Q53RY4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRTCAP3Q53RY4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRTCAP3Q53RY4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 RBM17P2-201ENST00000616397 1405 ntBASIC19■□□□□ 0.63
KRTCAP3Q53RY4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRTCAP3Q53RY4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
KRTCAP3Q53RY4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms