Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RSPO1Q2MKA7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RSPO1Q2MKA7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 AL358852.1-201ENST00000623174 1268 ntBASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RSPO1Q2MKA7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 MIR6084-201ENST00000622012 110 ntBASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RSPO1Q2MKA7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RSPO1Q2MKA7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.4■□□□□ 0.54
RSPO1Q2MKA7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.39■□□□□ 0.54
RSPO1Q2MKA7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RSPO1Q2MKA7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.39■□□□□ 0.53
RSPO1Q2MKA7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RSPO1Q2MKA7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms