Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CXCR4P61073 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CXCR4P61073 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CXCR4P61073 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CXCR4P61073 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CXCR4P61073 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXCR4P61073 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXCR4P61073 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXCR4P61073 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.3■□□□□ 0.68
CXCR4P61073 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CXCR4P61073 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CXCR4P61073 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CXCR4P61073 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.3■□□□□ 0.68
CXCR4P61073 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CXCR4P61073 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CXCR4P61073 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CXCR4P61073 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.29■□□□□ 0.68
CXCR4P61073 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.29■□□□□ 0.68
CXCR4P61073 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.29■□□□□ 0.68
CXCR4P61073 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CXCR4P61073 AC073314.1-201ENST00000568729 2216 ntBASIC19.29■□□□□ 0.68
CXCR4P61073 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.29■□□□□ 0.68
CXCR4P61073 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CXCR4P61073 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CXCR4P61073 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
CXCR4P61073 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.28■□□□□ 0.68
CXCR4P61073 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.28■□□□□ 0.68
CXCR4P61073 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.28■□□□□ 0.68
CXCR4P61073 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CXCR4P61073 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.28■□□□□ 0.68
CXCR4P61073 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CXCR4P61073 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CXCR4P61073 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.28■□□□□ 0.68
CXCR4P61073 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CXCR4P61073 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CXCR4P61073 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.28■□□□□ 0.68
CXCR4P61073 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CXCR4P61073 AC006128.1-201ENST00000624704 1661 ntBASIC19.27■□□□□ 0.68
CXCR4P61073 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.27■□□□□ 0.68
CXCR4P61073 OR7E47P-201ENST00000546390 1422 ntBASIC19.27■□□□□ 0.68
CXCR4P61073 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CXCR4P61073 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CXCR4P61073 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CXCR4P61073 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CXCR4P61073 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.27■□□□□ 0.68
CXCR4P61073 Z92544.1-202ENST00000571933 1220 ntBASIC19.27■□□□□ 0.68
CXCR4P61073 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CXCR4P61073 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.27■□□□□ 0.68
CXCR4P61073 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CXCR4P61073 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.27■□□□□ 0.67
CXCR4P61073 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CXCR4P61073 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CXCR4P61073 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.27■□□□□ 0.67
CXCR4P61073 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.27■□□□□ 0.67
CXCR4P61073 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CXCR4P61073 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
CXCR4P61073 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CXCR4P61073 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.26■□□□□ 0.67
CXCR4P61073 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CXCR4P61073 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CXCR4P61073 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.26■□□□□ 0.67
CXCR4P61073 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.26■□□□□ 0.67
CXCR4P61073 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 MIR4787-201ENST00000607364 84 ntBASIC19.26■□□□□ 0.67
CXCR4P61073 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CXCR4P61073 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms