Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.32■■□□□ 1
CXCL12P48061 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CXCL12P48061 AC092068.2-201ENST00000590491 1708 ntBASIC21.32■■□□□ 1
CXCL12P48061 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.32■■□□□ 1
CXCL12P48061 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CXCL12P48061 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.32■■□□□ 1
CXCL12P48061 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.32■■□□□ 1
CXCL12P48061 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.32■■□□□ 1
CXCL12P48061 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.32■■□□□ 1
CXCL12P48061 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.32■■□□□ 1
CXCL12P48061 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.32■■□□□ 1
CXCL12P48061 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.32■■□□□ 1
CXCL12P48061 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.32■■□□□ 1
CXCL12P48061 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CXCL12P48061 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CXCL12P48061 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.31■■□□□ 1
CXCL12P48061 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CXCL12P48061 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.31■■□□□ 1
CXCL12P48061 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.31■■□□□ 1
CXCL12P48061 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CXCL12P48061 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.31■■□□□ 1
CXCL12P48061 UBE2SP1-201ENST00000450587 669 ntBASIC21.31■■□□□ 1
CXCL12P48061 AC008550.1-201ENST00000511500 884 ntBASIC21.31■■□□□ 1
CXCL12P48061 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.31■■□□□ 1
CXCL12P48061 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CXCL12P48061 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.31■■□□□ 1
CXCL12P48061 AC243732.1-201ENST00000612648 864 ntBASIC21.31■■□□□ 1
CXCL12P48061 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.31■■□□□ 1
CXCL12P48061 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CXCL12P48061 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.31■■□□□ 1
CXCL12P48061 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CXCL12P48061 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.3■■□□□ 1
CXCL12P48061 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.3■■□□□ 1
CXCL12P48061 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CXCL12P48061 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.3■■□□□ 1
CXCL12P48061 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.3■■□□□ 1
CXCL12P48061 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CXCL12P48061 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.29■■□□□ 1
CXCL12P48061 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.29■■□□□ 1
CXCL12P48061 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.29■■□□□ 1
CXCL12P48061 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.29■■□□□ 1
CXCL12P48061 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.29■■□□□ 1
CXCL12P48061 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.29■■□□□ 1
CXCL12P48061 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.29■■□□□ 1
CXCL12P48061 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.29■■□□□ 1
CXCL12P48061 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CXCL12P48061 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.29■■□□□ 1
CXCL12P48061 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.29■■□□□ 1
CXCL12P48061 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.29■■□□□ 1
CXCL12P48061 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.29■■□□□ 1
CXCL12P48061 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CXCL12P48061 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.28■■□□□ 1
CXCL12P48061 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.28■■□□□ 1
CXCL12P48061 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.28■■□□□ 1
CXCL12P48061 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CXCL12P48061 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.28■■□□□ 1
CXCL12P48061 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CXCL12P48061 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CXCL12P48061 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.27■■□□□ 1
CXCL12P48061 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CXCL12P48061 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.27■■□□□ 1
CXCL12P48061 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CXCL12P48061 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
CXCL12P48061 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CXCL12P48061 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.27■■□□□ 1
CXCL12P48061 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.27■■□□□ 1
CXCL12P48061 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CXCL12P48061 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CXCL12P48061 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXCL12P48061 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXCL12P48061 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.26■□□□□ 0.99
CXCL12P48061 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXCL12P48061 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CXCL12P48061 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.26■□□□□ 0.99
CXCL12P48061 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.26■□□□□ 0.99
CXCL12P48061 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.26■□□□□ 0.99
CXCL12P48061 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CXCL12P48061 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CXCL12P48061 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCL12P48061 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CXCL12P48061 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCL12P48061 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCL12P48061 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.25■□□□□ 0.99
CXCL12P48061 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CXCL12P48061 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms