Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL8A2P25067 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.93■□□□□ 0.46
COL8A2P25067 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL8A2P25067 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL8A2P25067 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.92■□□□□ 0.46
COL8A2P25067 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.92■□□□□ 0.46
COL8A2P25067 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.92■□□□□ 0.46
COL8A2P25067 AC127496.7-201ENST00000625110 1798 ntBASIC17.92■□□□□ 0.46
COL8A2P25067 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.92■□□□□ 0.46
COL8A2P25067 ID1-201ENST00000376105 1233 ntBASIC17.92■□□□□ 0.46
COL8A2P25067 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COL8A2P25067 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.92■□□□□ 0.46
COL8A2P25067 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.92■□□□□ 0.46
COL8A2P25067 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.92■□□□□ 0.46
COL8A2P25067 EEF1DP3-203ENST00000566025 782 ntBASIC17.92■□□□□ 0.46
COL8A2P25067 MFSD11-216ENST00000590393 1141 ntBASIC17.92■□□□□ 0.46
COL8A2P25067 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL8A2P25067 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL8A2P25067 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 AC092053.2-201ENST00000640557 1818 ntBASIC17.91■□□□□ 0.46
COL8A2P25067 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 AC010141.2-201ENST00000452426 721 ntBASIC17.91■□□□□ 0.46
COL8A2P25067 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.91■□□□□ 0.46
COL8A2P25067 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 AC053503.5-201ENST00000601508 636 ntBASIC17.91■□□□□ 0.46
COL8A2P25067 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL8A2P25067 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL8A2P25067 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.9■□□□□ 0.46
COL8A2P25067 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
COL8A2P25067 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.9■□□□□ 0.46
COL8A2P25067 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.9■□□□□ 0.46
COL8A2P25067 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.9■□□□□ 0.46
COL8A2P25067 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL8A2P25067 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.9■□□□□ 0.46
COL8A2P25067 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
COL8A2P25067 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL8A2P25067 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.89■□□□□ 0.45
COL8A2P25067 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 MYCNOS-205ENST00000641950 531 ntBASIC17.89■□□□□ 0.45
COL8A2P25067 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 LINC00565-201ENST00000562710 2331 ntBASIC17.89■□□□□ 0.45
COL8A2P25067 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL8A2P25067 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.89■□□□□ 0.45
COL8A2P25067 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.88■□□□□ 0.45
COL8A2P25067 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.88■□□□□ 0.45
COL8A2P25067 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.88■□□□□ 0.45
COL8A2P25067 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.88■□□□□ 0.45
COL8A2P25067 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.88■□□□□ 0.45
COL8A2P25067 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COL8A2P25067 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 HLA-L-209ENST00000420110 1011 ntBASIC17.88■□□□□ 0.45
COL8A2P25067 CROCCP5-201ENST00000436658 830 ntBASIC17.88■□□□□ 0.45
COL8A2P25067 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL8A2P25067 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.88■□□□□ 0.45
COL8A2P25067 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms