Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 HRAS-211ENST00000493230 1114 ntTSL 1 (best)20.74■□□□□ 0.915e-6■■□□□ 11.5
XRCC6P12956 PHGDH-211ENST00000641213 2053 nt20.65■□□□□ 0.95e-6■■□□□ 11.5
XRCC6P12956 PPP6R2-206ENST00000427222 1811 ntTSL 520.59■□□□□ 0.891e-7■■□□□ 11.5
XRCC6P12956 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.885e-6■■□□□ 11.5
XRCC6P12956 PHGDH-229ENST00000641891 2175 nt20.53■□□□□ 0.885e-6■■□□□ 11.5
XRCC6P12956 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.851e-7■■□□□ 11.5
XRCC6P12956 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.26■□□□□ 0.831e-7■■□□□ 11.5
XRCC6P12956 RUSC1-216ENST00000497930 1156 ntTSL 320.22■□□□□ 0.831e-7■■□□□ 11.5
XRCC6P12956 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.15■□□□□ 0.825e-6■■□□□ 11.5
XRCC6P12956 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.11■□□□□ 0.815e-6■■□□□ 11.5
XRCC6P12956 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.811e-7■■□□□ 11.5
XRCC6P12956 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.09■□□□□ 0.819e-10■■□□□ 11.5
XRCC6P12956 PPP1CA-208ENST00000532446 1465 ntTSL 520.07■□□□□ 0.85e-6■■□□□ 11.5
XRCC6P12956 PHGDH-232ENST00000641947 1774 nt20.03■□□□□ 0.85e-6■■□□□ 11.5
XRCC6P12956 ARFGAP1-207ENST00000518618 1244 ntTSL 219.94■□□□□ 0.785e-6■■□□□ 11.5
XRCC6P12956 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.85■□□□□ 0.771e-7■■□□□ 11.5
XRCC6P12956 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.779e-10■■□□□ 11.5
XRCC6P12956 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.749e-10■■□□□ 11.5
XRCC6P12956 PHGDH-214ENST00000641314 1558 nt19.55■□□□□ 0.725e-6■■□□□ 11.5
XRCC6P12956 PHGDH-230ENST00000641927 1678 nt19.47■□□□□ 0.715e-6■■□□□ 11.5
XRCC6P12956 PHGDH-234ENST00000642041 943 nt19.44■□□□□ 0.75e-6■■□□□ 11.5
XRCC6P12956 PHGDH-227ENST00000641811 1031 nt19.29■□□□□ 0.685e-6■■□□□ 11.5
XRCC6P12956 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.665e-6■■□□□ 11.5
XRCC6P12956 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.665e-6■■□□□ 11.5
XRCC6P12956 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.13■□□□□ 0.655e-6■■□□□ 11.5
XRCC6P12956 PHGDH-216ENST00000641375 2196 nt19■□□□□ 0.635e-6■■□□□ 11.5
XRCC6P12956 AC079781.5-202ENST00000641784 3743 ntBASIC18.97■□□□□ 0.639e-10■■□□□ 11.5
XRCC6P12956 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.85■□□□□ 0.611e-7■■□□□ 11.5
XRCC6P12956 ARFGAP1-222ENST00000549076 913 ntTSL 218.84■□□□□ 0.615e-6■■□□□ 11.5
XRCC6P12956 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.8■□□□□ 0.65e-6■■□□□ 11.5
XRCC6P12956 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.591e-7■■□□□ 11.5
XRCC6P12956 ACAP3-207ENST00000470659 421 ntTSL 318.69■□□□□ 0.585e-6■■□□□ 11.5
XRCC6P12956 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.57■□□□□ 0.565e-6■■□□□ 11.5
XRCC6P12956 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.565e-6■■□□□ 11.5
XRCC6P12956 PHGDH-213ENST00000641272 758 nt18.45■□□□□ 0.545e-6■■□□□ 11.5
XRCC6P12956 RUSC1-213ENST00000489860 934 ntTSL 518.26■□□□□ 0.511e-7■■□□□ 11.5
XRCC6P12956 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.515e-6■■□□□ 11.5
XRCC6P12956 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.491e-7■■□□□ 11.5
XRCC6P12956 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC18.1■□□□□ 0.495e-6■■□□□ 11.5
XRCC6P12956 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.481e-7■■□□□ 11.5
XRCC6P12956 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.451e-7■■□□□ 11.5
XRCC6P12956 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.371e-7■■□□□ 11.5
XRCC6P12956 PHGDH-233ENST00000642021 2794 nt17.36■□□□□ 0.375e-6■■□□□ 11.5
XRCC6P12956 RUSC1-211ENST00000479924 930 ntTSL 317.09■□□□□ 0.331e-7■■□□□ 11.5
XRCC6P12956 GLB1-219ENST00000498537 570 ntTSL 417.06■□□□□ 0.325e-6■■□□□ 11.5
XRCC6P12956 PPP6R2-205ENST00000401672 2199 ntTSL 216.65■□□□□ 0.261e-7■■□□□ 11.5
XRCC6P12956 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.27■□□□□ 0.25e-6■■□□□ 11.5
XRCC6P12956 PHGDH-201ENST00000369407 3180 ntTSL 215.73■□□□□ 0.115e-6■■□□□ 11.5
XRCC6P12956 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.091e-7■■□□□ 11.5
XRCC6P12956 ARFGAP1-218ENST00000523460 572 ntTSL 415.55■□□□□ 0.085e-6■■□□□ 11.5
XRCC6P12956 GLB1-209ENST00000450835 540 ntTSL 415.23■□□□□ 0.035e-6■■□□□ 11.5
XRCC6P12956 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.025e-6■■□□□ 11.5
XRCC6P12956 PHGDH-207ENST00000496756 508 ntTSL 214.8□□□□□ -0.045e-6■■□□□ 11.5
XRCC6P12956 PHGDH-221ENST00000641573 1180 nt14.76□□□□□ -0.055e-6■■□□□ 11.5
XRCC6P12956 PHGDH-203ENST00000462324 767 ntTSL 514.73□□□□□ -0.055e-6■■□□□ 11.5
XRCC6P12956 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.11e-7■■□□□ 11.5
XRCC6P12956 PHGDH-220ENST00000641570 1036 nt14.42□□□□□ -0.15e-6■■□□□ 11.5
XRCC6P12956 PHGDH-218ENST00000641491 986 nt14.42□□□□□ -0.15e-6■■□□□ 11.5
XRCC6P12956 GLB1-211ENST00000464355 557 ntTSL 314.12□□□□□ -0.155e-6■■□□□ 11.5
XRCC6P12956 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.165e-6■■□□□ 11.5
XRCC6P12956 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC13.79□□□□□ -0.25e-6■■□□□ 11.5
XRCC6P12956 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC13.51□□□□□ -0.255e-6■■□□□ 11.5
XRCC6P12956 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.49e-10■■□□□ 11.5
XRCC6P12956 PHGDH-224ENST00000641711 712 nt12.01□□□□□ -0.495e-6■■□□□ 11.5
XRCC6P12956 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.499e-10■■□□□ 11.5
XRCC6P12956 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.585e-6■■□□□ 11.5
XRCC6P12956 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC11.18□□□□□ -0.629e-10■■□□□ 11.5
XRCC6P12956 PHGDH-215ENST00000641371 725 nt11.07□□□□□ -0.645e-6■■□□□ 11.5
XRCC6P12956 GLB1-204ENST00000415454 591 ntTSL 410.97□□□□□ -0.655e-6■■□□□ 11.5
XRCC6P12956 PHGDH-222ENST00000641587 566 nt10.96□□□□□ -0.655e-6■■□□□ 11.5
XRCC6P12956 PHGDH-206ENST00000493622 742 ntTSL 510.62□□□□□ -0.715e-6■■□□□ 11.5
XRCC6P12956 PHGDH-212ENST00000641247 710 nt10.59□□□□□ -0.715e-6■■□□□ 11.5
XRCC6P12956 PHGDH-219ENST00000641513 735 nt10.41□□□□□ -0.745e-6■■□□□ 11.5
XRCC6P12956 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.765e-6■■□□□ 11.5
XRCC6P12956 ASNS-213ENST00000454046 1947 ntTSL 510.11□□□□□ -0.799e-10■■□□□ 11.5
XRCC6P12956 GLB1-207ENST00000440656 626 ntTSL 49.82□□□□□ -0.845e-6■■□□□ 11.5
XRCC6P12956 TAL1-204ENST00000464796 237 ntTSL 1 (best)9.74□□□□□ -0.855e-6■■□□□ 11.5
XRCC6P12956 GLB1-215ENST00000482097 547 ntTSL 58.65□□□□□ -1.025e-6■■□□□ 11.5
XRCC6P12956 GLB1-216ENST00000485698 550 ntTSL 48.65□□□□□ -1.025e-6■■□□□ 11.5
XRCC6P12956 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.61□□□□□ -1.039e-10■■□□□ 11.5
XRCC6P12956 AC069277.1-204ENST00000342990 246 ntTSL 38.33□□□□□ -1.085e-6■■□□□ 11.5
XRCC6P12956 PHGDH-225ENST00000641720 548 nt8.13□□□□□ -1.115e-6■■□□□ 11.5
XRCC6P12956 MGEA5-204ENST00000429860 769 ntTSL 38.11□□□□□ -1.119e-10■■□□□ 11.5
XRCC6P12956 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.08□□□□□ -1.129e-10■■□□□ 11.5
XRCC6P12956 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.175e-6■■□□□ 11.5
XRCC6P12956 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.215e-6■■□□□ 11.5
XRCC6P12956 EPM2AIP1-202ENST00000623924 543 ntTSL 57.29□□□□□ -1.245e-6■■□□□ 11.5
XRCC6P12956 GLB1-206ENST00000438227 569 ntTSL 46.81□□□□□ -1.325e-6■■□□□ 11.5
XRCC6P12956 SYCP2L-205ENST00000487561 644 ntTSL 36.13□□□□□ -1.435e-6■■□□□ 11.5
XRCC6P12956 RPS6KC1-203ENST00000468069 784 ntTSL 36.04□□□□□ -1.445e-6■■□□□ 11.5
XRCC6P12956 MKI67-205ENST00000484853 733 ntTSL 25.59□□□□□ -1.515e-6■■□□□ 11.5
XRCC6P12956 ZFAS1-207ENST00000458653 596 ntTSL 231.57■■■□□ 2.643e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)28.08■■■□□ 2.093e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)26.72■■□□□ 1.873e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)24.18■■□□□ 1.463e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.18■■□□□ 1.463e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC11.43□□□□□ -0.583e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-209ENST00000620594 508 ntTSL 38.55□□□□□ -1.043e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-204ENST00000428008 566 ntTSL 27.94□□□□□ -1.143e-30■■□□□ 11.5
XRCC6P12956 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)7.93□□□□□ -1.143e-30■■□□□ 11.5
Retrieved 100 of 6,788 protein–RNA pairs in 45.4 ms