Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHGBP05060 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.65■■□□□ 1.7
CHGBP05060 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHGBP05060 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.65■■□□□ 1.7
CHGBP05060 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.65■■□□□ 1.7
CHGBP05060 AC104564.3-201ENST00000582367 638 ntBASIC25.65■■□□□ 1.7
CHGBP05060 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHGBP05060 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHGBP05060 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHGBP05060 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHGBP05060 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHGBP05060 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.64■■□□□ 1.7
CHGBP05060 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.64■■□□□ 1.7
CHGBP05060 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.64■■□□□ 1.7
CHGBP05060 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.64■■□□□ 1.7
CHGBP05060 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHGBP05060 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CHGBP05060 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHGBP05060 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.64■■□□□ 1.69
CHGBP05060 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHGBP05060 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHGBP05060 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHGBP05060 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHGBP05060 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.63■■□□□ 1.69
CHGBP05060 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.63■■□□□ 1.69
CHGBP05060 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.63■■□□□ 1.69
CHGBP05060 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.63■■□□□ 1.69
CHGBP05060 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHGBP05060 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHGBP05060 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHGBP05060 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHGBP05060 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHGBP05060 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.63■■□□□ 1.69
CHGBP05060 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CHGBP05060 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHGBP05060 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
CHGBP05060 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.62■■□□□ 1.69
CHGBP05060 EEF1DP3-203ENST00000566025 782 ntBASIC25.62■■□□□ 1.69
CHGBP05060 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHGBP05060 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CHGBP05060 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CHGBP05060 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHGBP05060 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.61■■□□□ 1.69
CHGBP05060 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.61■■□□□ 1.69
CHGBP05060 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.61■■□□□ 1.69
CHGBP05060 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHGBP05060 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.61■■□□□ 1.69
CHGBP05060 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHGBP05060 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CHGBP05060 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CHGBP05060 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
CHGBP05060 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.61■■□□□ 1.69
CHGBP05060 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHGBP05060 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CHGBP05060 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CHGBP05060 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.61■■□□□ 1.69
CHGBP05060 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CHGBP05060 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
CHGBP05060 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.6■■□□□ 1.69
CHGBP05060 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.6■■□□□ 1.69
CHGBP05060 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.6■■□□□ 1.69
CHGBP05060 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.6■■□□□ 1.69
CHGBP05060 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.6■■□□□ 1.69
CHGBP05060 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CHGBP05060 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHGBP05060 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHGBP05060 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.59■■□□□ 1.69
CHGBP05060 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.59■■□□□ 1.69
CHGBP05060 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.59■■□□□ 1.69
CHGBP05060 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHGBP05060 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.59■■□□□ 1.69
CHGBP05060 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHGBP05060 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHGBP05060 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.58■■□□□ 1.69
CHGBP05060 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHGBP05060 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.58■■□□□ 1.69
CHGBP05060 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.58■■□□□ 1.69
CHGBP05060 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.58■■□□□ 1.69
CHGBP05060 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.58■■□□□ 1.69
CHGBP05060 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHGBP05060 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHGBP05060 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CHGBP05060 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHGBP05060 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CHGBP05060 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.57■■□□□ 1.68
CHGBP05060 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHGBP05060 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.57■■□□□ 1.68
CHGBP05060 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CHGBP05060 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.57■■□□□ 1.68
CHGBP05060 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.57■■□□□ 1.68
CHGBP05060 AC079834.2-201ENST00000609776 1949 ntBASIC25.57■■□□□ 1.68
CHGBP05060 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms