Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CLPTM1O96005 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.91■□□□□ 0.78
CLPTM1O96005 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CLPTM1O96005 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPTM1O96005 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPTM1O96005 GUSBP5-201ENST00000418136 578 ntBASIC19.91■□□□□ 0.78
CLPTM1O96005 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPTM1O96005 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.91■□□□□ 0.78
CLPTM1O96005 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.91■□□□□ 0.78
CLPTM1O96005 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLPTM1O96005 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CLPTM1O96005 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.9■□□□□ 0.78
CLPTM1O96005 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.9■□□□□ 0.78
CLPTM1O96005 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.9■□□□□ 0.78
CLPTM1O96005 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLPTM1O96005 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLPTM1O96005 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.9■□□□□ 0.78
CLPTM1O96005 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.89■□□□□ 0.77
CLPTM1O96005 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.89■□□□□ 0.77
CLPTM1O96005 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPTM1O96005 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLPTM1O96005 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.89■□□□□ 0.77
CLPTM1O96005 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLPTM1O96005 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPTM1O96005 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLPTM1O96005 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPTM1O96005 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLPTM1O96005 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.88■□□□□ 0.77
CLPTM1O96005 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.88■□□□□ 0.77
CLPTM1O96005 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLPTM1O96005 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLPTM1O96005 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.87■□□□□ 0.77
CLPTM1O96005 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.87■□□□□ 0.77
CLPTM1O96005 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.87■□□□□ 0.77
CLPTM1O96005 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.87■□□□□ 0.77
CLPTM1O96005 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.87■□□□□ 0.77
CLPTM1O96005 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.87■□□□□ 0.77
CLPTM1O96005 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLPTM1O96005 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.87■□□□□ 0.77
CLPTM1O96005 PCDHAC2-203ENST00000615316 3011 ntBASIC19.86■□□□□ 0.77
CLPTM1O96005 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CLPTM1O96005 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLPTM1O96005 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CLPTM1O96005 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPTM1O96005 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPTM1O96005 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLPTM1O96005 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
CLPTM1O96005 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLPTM1O96005 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.85■□□□□ 0.77
CLPTM1O96005 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLPTM1O96005 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms