Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GMDSO60547 AL391422.3-201ENST00000603791 2761 ntBASIC18.68■□□□□ 0.58
GMDSO60547 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GMDSO60547 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GMDSO60547 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GMDSO60547 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GMDSO60547 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.68■□□□□ 0.58
GMDSO60547 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GMDSO60547 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.67■□□□□ 0.58
GMDSO60547 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.67■□□□□ 0.58
GMDSO60547 AC024257.2-201ENST00000549699 147 ntBASIC18.67■□□□□ 0.58
GMDSO60547 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.67■□□□□ 0.58
GMDSO60547 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.67■□□□□ 0.58
GMDSO60547 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.67■□□□□ 0.58
GMDSO60547 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.67■□□□□ 0.58
GMDSO60547 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GMDSO60547 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GMDSO60547 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.66■□□□□ 0.58
GMDSO60547 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GMDSO60547 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.66■□□□□ 0.58
GMDSO60547 AC106739.1-201ENST00000617035 715 ntBASIC18.66■□□□□ 0.58
GMDSO60547 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 AC244015.2-201ENST00000616358 1861 ntBASIC18.66■□□□□ 0.58
GMDSO60547 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.66■□□□□ 0.58
GMDSO60547 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.66■□□□□ 0.58
GMDSO60547 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GMDSO60547 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GMDSO60547 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GMDSO60547 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.65■□□□□ 0.58
GMDSO60547 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.65■□□□□ 0.58
GMDSO60547 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.65■□□□□ 0.58
GMDSO60547 PBX2P1-201ENST00000493219 1291 ntBASIC18.65■□□□□ 0.58
GMDSO60547 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.65■□□□□ 0.58
GMDSO60547 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.65■□□□□ 0.58
GMDSO60547 MIR4767-201ENST00000582827 78 ntBASIC18.65■□□□□ 0.58
GMDSO60547 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
GMDSO60547 AC087239.1-201ENST00000622671 572 ntBASIC18.65■□□□□ 0.58
GMDSO60547 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.65■□□□□ 0.58
GMDSO60547 AF106564.1-201ENST00000607058 2553 ntBASIC18.65■□□□□ 0.58
GMDSO60547 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GMDSO60547 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GMDSO60547 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GMDSO60547 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GMDSO60547 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
GMDSO60547 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.64■□□□□ 0.57
GMDSO60547 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
GMDSO60547 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.64■□□□□ 0.57
GMDSO60547 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
GMDSO60547 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
GMDSO60547 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
GMDSO60547 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
GMDSO60547 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
GMDSO60547 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GMDSO60547 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GMDSO60547 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
GMDSO60547 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.63■□□□□ 0.57
GMDSO60547 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.63■□□□□ 0.57
GMDSO60547 BX842568.3-201ENST00000418104 571 ntBASIC18.63■□□□□ 0.57
GMDSO60547 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.63■□□□□ 0.57
GMDSO60547 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.63■□□□□ 0.57
GMDSO60547 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GMDSO60547 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GMDSO60547 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GMDSO60547 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms