Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 TSPY13P-201ENST00000338964 914 ntBASIC18.52■□□□□ 0.56
SHISA3A0PJX4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 AC006128.1-201ENST00000624704 1661 ntBASIC18.52■□□□□ 0.56
SHISA3A0PJX4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SHISA3A0PJX4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.52■□□□□ 0.55
SHISA3A0PJX4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHISA3A0PJX4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHISA3A0PJX4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHISA3A0PJX4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 KRT8P33-201ENST00000508125 1423 ntBASIC18.51■□□□□ 0.55
SHISA3A0PJX4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.51■□□□□ 0.55
SHISA3A0PJX4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.51■□□□□ 0.55
SHISA3A0PJX4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 AC003102.1-202ENST00000563394 1796 ntBASIC18.5■□□□□ 0.55
SHISA3A0PJX4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHISA3A0PJX4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHISA3A0PJX4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHISA3A0PJX4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms