Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLCF1Q9UBD9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLCF1Q9UBD9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.92■□□□□ 0.62
CLCF1Q9UBD9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 CROCCP5-201ENST00000436658 830 ntBASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 DUX4L16-201ENST00000555130 1264 ntBASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCF1Q9UBD9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCF1Q9UBD9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.89■□□□□ 0.62
CLCF1Q9UBD9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCF1Q9UBD9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 MIR663A-201ENST00000385250 93 ntBASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 AC006970.2-201ENST00000450065 779 ntBASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 SLC7A5P1-201ENST00000568957 537 ntBASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCF1Q9UBD9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms