Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HINT3Q9NQE9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HINT3Q9NQE9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HINT3Q9NQE9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.18■□□□□ 0.66
HINT3Q9NQE9 UNC93B3-201ENST00000308076 687 ntBASIC19.18■□□□□ 0.66
HINT3Q9NQE9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HINT3Q9NQE9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HINT3Q9NQE9 OR2I1P-207ENST00000453522 948 ntBASIC19.18■□□□□ 0.66
HINT3Q9NQE9 MIR3181-201ENST00000578512 73 ntBASIC19.18■□□□□ 0.66
HINT3Q9NQE9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HINT3Q9NQE9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HINT3Q9NQE9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 AC110285.6-201ENST00000617652 491 ntBASIC19.17■□□□□ 0.66
HINT3Q9NQE9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HINT3Q9NQE9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HINT3Q9NQE9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HINT3Q9NQE9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.16■□□□□ 0.66
HINT3Q9NQE9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HINT3Q9NQE9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HINT3Q9NQE9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HINT3Q9NQE9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HINT3Q9NQE9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 SYT6-210ENST00000641643 1587 ntBASIC19.15■□□□□ 0.66
HINT3Q9NQE9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 AC010141.3-201ENST00000456659 717 ntBASIC19.15■□□□□ 0.66
HINT3Q9NQE9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 AL136162.1-201ENST00000607711 1078 ntBASIC19.15■□□□□ 0.66
HINT3Q9NQE9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HINT3Q9NQE9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.14■□□□□ 0.66
HINT3Q9NQE9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
HINT3Q9NQE9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.66
HINT3Q9NQE9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 PBX2P1-201ENST00000493219 1291 ntBASIC19.14■□□□□ 0.65
HINT3Q9NQE9 AC087239.1-201ENST00000622671 572 ntBASIC19.14■□□□□ 0.65
HINT3Q9NQE9 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.14■□□□□ 0.65
HINT3Q9NQE9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 AC010525.1-201ENST00000585559 441 ntBASIC19.13■□□□□ 0.65
HINT3Q9NQE9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HINT3Q9NQE9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms