Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.16□□□□□ -0.31e-6■■■□□ 17.3
EWSR1Q01844 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.481e-6■■■□□ 17.3
EWSR1Q01844 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.656e-7■■■□□ 17.3
EWSR1Q01844 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)17.41■□□□□ 0.386e-7■■■□□ 17.3
EWSR1Q01844 RABL6-209ENST00000466096 3949 ntTSL 1 (best)12.72□□□□□ -0.372e-8■■■□□ 17.3
EWSR1Q01844 STK11-206ENST00000586358 770 ntTSL 510.97□□□□□ -0.651e-6■■■□□ 17.3
EWSR1Q01844 STK11-203ENST00000585748 746 ntTSL 310.68□□□□□ -0.71e-6■■■□□ 17.3
EWSR1Q01844 STK11-209ENST00000593219 637 ntTSL 310.44□□□□□ -0.741e-6■■■□□ 17.3
EWSR1Q01844 STK11-204ENST00000585851 505 ntTSL 310.02□□□□□ -0.811e-6■■■□□ 17.3
EWSR1Q01844 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.08■□□□□ 0.019e-7■■■□□ 17.3
EWSR1Q01844 GSE1-213ENST00000568080 289 ntTSL 510.92□□□□□ -0.661e-7■■■□□ 17.3
EWSR1Q01844 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.82■■□□□ 1.083e-14■■■□□ 17.3
EWSR1Q01844 PI4KAP1-203ENST00000612500 1869 ntTSL 214.1□□□□□ -0.153e-14■■■□□ 17.3
EWSR1Q01844 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.441e-6■■■□□ 17.2
EWSR1Q01844 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.151e-6■■■□□ 17.2
EWSR1Q01844 UBE2I-218ENST00000568288 501 ntTSL 513.43□□□□□ -0.261e-6■■■□□ 17.2
EWSR1Q01844 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.321e-6■■■□□ 17.2
EWSR1Q01844 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.51e-6■■■□□ 17.2
EWSR1Q01844 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.591e-6■■■□□ 17.2
EWSR1Q01844 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.591e-6■■■□□ 17.2
EWSR1Q01844 ARVCF-209ENST00000487793 863 ntTSL 212.98□□□□□ -0.331e-6■■■□□ 17.2
EWSR1Q01844 ARVCF-210ENST00000492625 631 ntTSL 310.58□□□□□ -0.721e-6■■■□□ 17.2
EWSR1Q01844 HMBOX1-215ENST00000560599 1426 ntTSL 516.01■□□□□ 0.154e-8■■■□□ 17.2
EWSR1Q01844 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.76■□□□□ 0.114e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.25□□□□□ -0.134e-8■■■□□ 17.2
EWSR1Q01844 LMNB1-204ENST00000463908 557 ntTSL 414.24□□□□□ -0.134e-8■■■□□ 17.2
EWSR1Q01844 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.194e-8■■■□□ 17.2
EWSR1Q01844 JADE1-206ENST00000507833 552 ntTSL 413.52□□□□□ -0.254e-8■■■□□ 17.2
EWSR1Q01844 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.284e-8■■■□□ 17.2
EWSR1Q01844 LMNB1-203ENST00000460265 3475 ntTSL 1 (best)13.05□□□□□ -0.324e-8■■■□□ 17.2
EWSR1Q01844 LMNB1-206ENST00000492190 738 ntTSL 313.02□□□□□ -0.334e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.02□□□□□ -0.494e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.594e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-213ENST00000560269 569 ntTSL 410.65□□□□□ -0.74e-8■■■□□ 17.2
EWSR1Q01844 LINC01667-201ENST00000623554 1137 ntTSL 5 BASIC9.83□□□□□ -0.842e-15■■■□□ 17.2
EWSR1Q01844 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.014e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.024e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-207ENST00000519662 811 ntTSL 48.02□□□□□ -1.134e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-208ENST00000521516 2216 ntTSL 25.81□□□□□ -1.484e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-214ENST00000560357 979 ntTSL 25.74□□□□□ -1.494e-8■■■□□ 17.2
EWSR1Q01844 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.79□□□□□ -1.644e-8■■■□□ 17.2
EWSR1Q01844 LMNB1-208ENST00000504788 1801 ntTSL 23.76□□□□□ -1.814e-8■■■□□ 17.2
EWSR1Q01844 LMNB1-205ENST00000472034 730 ntTSL 33.46□□□□□ -1.864e-8■■■□□ 17.2
EWSR1Q01844 AC233280.19-201ENST00000633223 136 ntBASIC9.32□□□□□ -0.924e-11■■■□□ 17.2
EWSR1Q01844 CCDC57-207ENST00000419322 2829 ntAPPRIS ALT2 TSL 513.04□□□□□ -0.323e-6■■■□□ 17.2
EWSR1Q01844 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.523e-6■■■□□ 17.2
EWSR1Q01844 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.523e-6■■■□□ 17.2
EWSR1Q01844 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.486e-6■■■□□ 17.2
EWSR1Q01844 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.65■□□□□ 0.426e-6■■■□□ 17.2
EWSR1Q01844 USF2-216ENST00000607959 1920 ntTSL 517.53■□□□□ 0.46e-6■■■□□ 17.2
EWSR1Q01844 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.38□□□□□ -0.116e-6■■■□□ 17.2
EWSR1Q01844 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.84□□□□□ -0.196e-6■■■□□ 17.2
EWSR1Q01844 USF2-213ENST00000600341 1392 ntTSL 213.49□□□□□ -0.256e-6■■■□□ 17.2
EWSR1Q01844 USF2-211ENST00000599471 1173 ntTSL 313.26□□□□□ -0.296e-6■■■□□ 17.2
EWSR1Q01844 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.25□□□□□ -0.296e-6■■■□□ 17.2
EWSR1Q01844 USF2-208ENST00000596380 550 ntTSL 312.53□□□□□ -0.46e-6■■■□□ 17.2
EWSR1Q01844 USF2-212ENST00000599625 446 ntTSL 26.79□□□□□ -1.326e-6■■■□□ 17.2
EWSR1Q01844 USF2-209ENST00000597671 464 ntTSL 54.81□□□□□ -1.646e-6■■■□□ 17.2
EWSR1Q01844 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.191e-7■■■□□ 17.1
EWSR1Q01844 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC10.71□□□□□ -0.691e-7■■■□□ 17.1
EWSR1Q01844 MTA1-220ENST00000552286 1943 ntTSL 216.33■□□□□ 0.214e-7■■■□□ 17.1
EWSR1Q01844 MTA1-206ENST00000434050 2050 ntTSL 1 (best)14.82□□□□□ -0.044e-7■■■□□ 17.1
EWSR1Q01844 SET-209ENST00000480217 509 ntTSL 511.92□□□□□ -0.51e-6■■■□□ 17.1
EWSR1Q01844 SET-208ENST00000477806 957 ntTSL 1 (best)8.5□□□□□ -1.051e-6■■■□□ 17.1
EWSR1Q01844 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.81■■□□□ 1.244e-7■■■□□ 17.1
EWSR1Q01844 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.48■■□□□ 1.194e-7■■■□□ 17.1
EWSR1Q01844 AGAP3-209ENST00000469901 582 ntTSL 314.58□□□□□ -0.084e-7■■■□□ 17.1
EWSR1Q01844 OPLAH-201ENST00000527993 635 ntTSL 516.56■□□□□ 0.242e-6■■■□□ 17.1
EWSR1Q01844 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.92□□□□□ -0.029e-7■■■□□ 17.1
EWSR1Q01844 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.039e-7■■■□□ 17.1
EWSR1Q01844 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.319e-7■■■□□ 17.1
EWSR1Q01844 P2RY11-202ENST00000471843 554 ntTSL 411.53□□□□□ -0.562e-8■■■□□ 17.1
EWSR1Q01844 UBE2I-216ENST00000567383 538 ntTSL 412.59□□□□□ -0.395e-7■■■□□ 17.1
EWSR1Q01844 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.598e-10■■■□□ 17.1
EWSR1Q01844 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.61□□□□□ -0.238e-10■■■□□ 17.1
EWSR1Q01844 KCTD15-205ENST00000588637 571 ntTSL 512.9□□□□□ -0.348e-10■■■□□ 17.1
EWSR1Q01844 KCTD15-209ENST00000590771 577 ntTSL 312.13□□□□□ -0.478e-10■■■□□ 17.1
EWSR1Q01844 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.253e-6■■■□□ 17
EWSR1Q01844 DNAJC5-202ENST00000470551 5287 ntTSL 212.48□□□□□ -0.413e-6■■■□□ 17
EWSR1Q01844 UBE2I-209ENST00000562470 433 ntTSL 210.56□□□□□ -0.726e-7■■■□□ 17
EWSR1Q01844 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)12.39□□□□□ -0.433e-8■■■□□ 17
EWSR1Q01844 BRD4-210ENST00000601941 604 ntTSL 510.12□□□□□ -0.793e-8■■■□□ 17
EWSR1Q01844 ZNF598-206ENST00000564824 2147 ntTSL 521.2■□□□□ 0.983e-7■■■□□ 17
EWSR1Q01844 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.783e-7■■■□□ 17
EWSR1Q01844 ZNF598-207ENST00000565396 4457 ntTSL 217.08■□□□□ 0.323e-7■■■□□ 17
EWSR1Q01844 ZNF598-203ENST00000562988 3382 ntTSL 516.68■□□□□ 0.263e-7■■■□□ 17
EWSR1Q01844 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.253e-7■■■□□ 17
EWSR1Q01844 MICALL2-204ENST00000467394 2080 ntTSL 216.97■□□□□ 0.311e-7■■■□□ 17
EWSR1Q01844 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.02□□□□□ -0.324e-7■■■□□ 17
EWSR1Q01844 CNN2-203ENST00000562015 563 ntTSL 410.78□□□□□ -0.681e-6■■■□□ 17
EWSR1Q01844 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.255e-7■■■□□ 17
EWSR1Q01844 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.42□□□□□ -0.425e-7■■■□□ 17
EWSR1Q01844 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.1□□□□□ -0.475e-7■■■□□ 17
EWSR1Q01844 PTTG1IP-207ENST00000494690 612 ntTSL 59.09□□□□□ -0.956e-7■■■□□ 17
EWSR1Q01844 BCR-204ENST00000427791 771 ntTSL 1 (best)9.73□□□□□ -0.854e-7■■■□□ 16.9
EWSR1Q01844 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.79■□□□□ 0.121e-7■■■□□ 16.9
EWSR1Q01844 SH3D21-203ENST00000480549 3182 ntTSL 213.94□□□□□ -0.182e-7■■■□□ 16.9
EWSR1Q01844 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.365e-7■■■□□ 16.9
EWSR1Q01844 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.655e-7■■■□□ 16.9
EWSR1Q01844 MTA1-205ENST00000426567 568 ntTSL 310.58□□□□□ -0.726e-7■■■□□ 16.9
Retrieved 100 of 7,101 protein–RNA pairs in 44.6 ms