Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.61e-8■■■■□ 24.2
MATR3P43243 PDE4D-218ENST00000509368 2809 ntTSL 1 (best)2.26□□□□□ -2.052e-6■■■■□ 24.2
MATR3P43243 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.281e-6■■■■□ 24.2
MATR3P43243 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.91e-6■■■■□ 24.2
MATR3P43243 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.32■□□□□ 0.841e-6■■■■□ 24.2
MATR3P43243 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.431e-6■■■■□ 24.2
MATR3P43243 CD55-211ENST00000635614 1145 ntTSL 511.38□□□□□ -0.591e-6■■■■□ 24.2
MATR3P43243 CD55-208ENST00000476590 2163 ntTSL 1 (best)4.62□□□□□ -1.671e-6■■■■□ 24.2
MATR3P43243 CD55-210ENST00000634386 951 ntTSL 54.29□□□□□ -1.721e-6■■■■□ 24.2
MATR3P43243 CD55-207ENST00000465534 1480 ntTSL 1 (best)3.22□□□□□ -1.891e-6■■■■□ 24.2
MATR3P43243 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.152e-6■■■■□ 24.2
MATR3P43243 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.752e-6■■■■□ 24.1
MATR3P43243 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.132e-6■■■■□ 24.1
MATR3P43243 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.162e-6■■■■□ 24.1
MATR3P43243 ERI1-204ENST00000520332 750 ntTSL 32.54□□□□□ -22e-6■■■■□ 24.1
MATR3P43243 NRDC-211ENST00000491410 1020 ntTSL 221.5■■□□□ 1.035e-7■■■■□ 24.1
MATR3P43243 NRDC-205ENST00000468722 754 ntTSL 317.06■□□□□ 0.325e-7■■■■□ 24.1
MATR3P43243 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.255e-7■■■■□ 24.1
MATR3P43243 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.075e-7■■■■□ 24.1
MATR3P43243 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC14.89□□□□□ -0.035e-7■■■■□ 24.1
MATR3P43243 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.35e-7■■■■□ 24.1
MATR3P43243 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.549e-7■■■■□ 24.1
MATR3P43243 CDCA2-205ENST00000523454 922 ntTSL 54.4□□□□□ -1.713e-6■■■■□ 24.1
MATR3P43243 COX11-204ENST00000572558 1054 ntTSL 316.52■□□□□ 0.242e-8■■■■□ 24.1
MATR3P43243 COX11-209ENST00000576370 2663 ntTSL 1 (best)12.63□□□□□ -0.392e-8■■■■□ 24.1
MATR3P43243 AC007485.2-201ENST00000623493 1667 ntBASIC7.22□□□□□ -1.252e-8■■■■□ 24.1
MATR3P43243 COX11-206ENST00000574821 495 ntTSL 24.33□□□□□ -1.722e-8■■■■□ 24.1
MATR3P43243 COX11-205ENST00000573912 453 ntTSL 23.79□□□□□ -1.82e-8■■■■□ 24.1
MATR3P43243 ZNF430-202ENST00000594110 536 ntTSL 413.91□□□□□ -0.183e-6■■■■□ 24.1
MATR3P43243 ZNF430-206ENST00000599548 595 ntTSL 5 BASIC11.72□□□□□ -0.533e-6■■■■□ 24.1
MATR3P43243 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.993e-6■■■■□ 24.1
MATR3P43243 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.46□□□□□ -1.383e-9■■■■□ 24.1
MATR3P43243 LINC01033-203ENST00000517934 306 ntTSL 21.44□□□□□ -2.183e-9■■■■□ 24.1
MATR3P43243 HIVEP2-205ENST00000474532 258 ntTSL 56.85□□□□□ -1.314e-8■■■■□ 24.1
MATR3P43243 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)10.42□□□□□ -0.742e-6■■■■□ 24.1
MATR3P43243 ELP3-218ENST00000524103 1914 ntTSL 2 BASIC11.99□□□□□ -0.493e-6■■■■□ 24.1
MATR3P43243 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.653e-6■■■■□ 24.1
MATR3P43243 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC10.12□□□□□ -0.793e-6■■■■□ 24.1
MATR3P43243 ELP3-204ENST00000518112 2059 ntTSL 29.96□□□□□ -0.813e-6■■■■□ 24.1
MATR3P43243 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC9.62□□□□□ -0.873e-6■■■■□ 24.1
MATR3P43243 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC9.52□□□□□ -0.893e-6■■■■□ 24.1
MATR3P43243 ELP3-216ENST00000523687 1923 ntTSL 28.68□□□□□ -1.023e-6■■■■□ 24.1
MATR3P43243 ELP3-205ENST00000519261 1924 ntTSL 28.64□□□□□ -1.033e-6■■■■□ 24.1
MATR3P43243 ELP3-207ENST00000520110 779 ntTSL 37.25□□□□□ -1.253e-6■■■■□ 24.1
MATR3P43243 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.374e-7■■■■□ 24.1
MATR3P43243 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.631e-10■■■■□ 24.1
MATR3P43243 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.181e-10■■■■□ 24.1
MATR3P43243 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.181e-10■■■■□ 24.1
MATR3P43243 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC13.13□□□□□ -0.311e-10■■■■□ 24.1
MATR3P43243 DNM2-215ENST00000590806 5651 ntTSL 216.96■□□□□ 0.313e-6■■■■□ 24.1
MATR3P43243 PTK2-230ENST00000521250 592 ntTSL 410.44□□□□□ -0.743e-7■■■■□ 24.1
MATR3P43243 PTK2-236ENST00000521981 552 ntTSL 510.41□□□□□ -0.743e-7■■■■□ 24.1
MATR3P43243 PTK2-238ENST00000521986 2393 ntTSL 29.48□□□□□ -0.893e-7■■■■□ 24.1
MATR3P43243 PTK2-246ENST00000523539 3236 ntTSL 27.61□□□□□ -1.193e-7■■■■□ 24.1
MATR3P43243 UBAC2-201ENST00000355700 748 ntTSL 318.76■□□□□ 0.598e-7■■■■□ 24.1
MATR3P43243 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.538e-7■■■■□ 24.1
MATR3P43243 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.35■□□□□ 0.378e-7■■■■□ 24.1
MATR3P43243 UBAC2-206ENST00000468067 968 ntTSL 212.57□□□□□ -0.48e-7■■■■□ 24.1
MATR3P43243 UBAC2-207ENST00000473091 610 ntTSL 411.57□□□□□ -0.568e-7■■■■□ 24.1
MATR3P43243 POLE3-204ENST00000479871 2396 ntTSL 215.69■□□□□ 0.19e-21■■■■□ 24.1
MATR3P43243 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC14.31□□□□□ -0.124e-29■■■■□ 24.1
MATR3P43243 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.26□□□□□ -0.134e-29■■■■□ 24.1
MATR3P43243 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.274e-29■■■■□ 24.1
MATR3P43243 POLE3-202ENST00000374171 2191 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.329e-21■■■■□ 24.1
MATR3P43243 POLE3-201ENST00000374169 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.489e-21■■■■□ 24.1
MATR3P43243 GMCL1-202ENST00000468386 808 ntTSL 526.92■■□□□ 1.92e-7■■■■□ 24
MATR3P43243 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.172e-7■■■■□ 24
MATR3P43243 ZRANB3-205ENST00000452187 1269 ntTSL 511.61□□□□□ -0.558e-7■■■■□ 24
MATR3P43243 ZRANB3-208ENST00000492193 546 ntTSL 39.97□□□□□ -0.818e-7■■■■□ 24
MATR3P43243 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.028e-7■■■■□ 24
MATR3P43243 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.31□□□□□ -1.088e-7■■■■□ 24
MATR3P43243 ZRANB3-203ENST00000403017 4130 ntTSL 55.83□□□□□ -1.488e-7■■■■□ 24
MATR3P43243 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.588e-7■■■■□ 24
MATR3P43243 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.23■■□□□ 1.319e-7■■■■□ 24
MATR3P43243 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.15■□□□□ 0.349e-7■■■■□ 24
MATR3P43243 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.289e-7■■■■□ 24
MATR3P43243 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC10.86□□□□□ -0.679e-7■■■■□ 24
MATR3P43243 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.849e-7■■■■□ 24
MATR3P43243 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.62□□□□□ -0.879e-7■■■■□ 24
MATR3P43243 SETD2-203ENST00000412450 4231 ntTSL 213.48□□□□□ -0.252e-6■■■■□ 24
MATR3P43243 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.71■■□□□ 1.232e-7■■■■□ 24
MATR3P43243 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.86■□□□□ 0.292e-7■■■■□ 24
MATR3P43243 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.112e-7■■■■□ 24
MATR3P43243 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.15□□□□□ -1.12e-7■■■■□ 24
MATR3P43243 PARN-213ENST00000564904 468 ntTSL 53.99□□□□□ -1.772e-7■■■■□ 24
MATR3P43243 ARHGAP32-204ENST00000525234 719 ntTSL 333.97■■■■□ 3.032e-6■■■■□ 24
MATR3P43243 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.136e-7■■■■□ 24
MATR3P43243 DENND1A-207ENST00000474676 603 ntTSL 510.62□□□□□ -0.712e-6■■■■□ 24
MATR3P43243 ZNF44-205ENST00000397742 2372 ntTSL 215.99■□□□□ 0.154e-6■■■■□ 24
MATR3P43243 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.164e-6■■■■□ 24
MATR3P43243 ZNF44-208ENST00000600003 2051 ntTSL 213.38□□□□□ -0.274e-6■■■■□ 24
MATR3P43243 ZNF44-201ENST00000354656 517 ntTSL 312.73□□□□□ -0.374e-6■■■■□ 24
MATR3P43243 ZNF44-203ENST00000356109 2706 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.414e-6■■■■□ 24
MATR3P43243 ZNF44-204ENST00000393337 3236 ntTSL 1 (best)10.32□□□□□ -0.764e-6■■■■□ 24
MATR3P43243 C3-207ENST00000596238 563 ntTSL 28.24□□□□□ -1.094e-6■■■■□ 24
MATR3P43243 PPA2-206ENST00000457404 778 ntTSL 223.3■■□□□ 1.325e-7■■■■□ 24
MATR3P43243 PPA2-215ENST00000508518 677 ntTSL 521.58■■□□□ 1.055e-7■■■■□ 24
MATR3P43243 PPA2-217ENST00000509426 1356 ntTSL 219.8■□□□□ 0.765e-7■■■■□ 24
MATR3P43243 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.5■□□□□ 0.715e-7■■■■□ 24
MATR3P43243 PPA2-218ENST00000510015 582 ntTSL 519.43■□□□□ 0.75e-7■■■■□ 24
Retrieved 100 of 16,209 protein–RNA pairs in 102.4 ms