RNA–Protein interactions for RNA: ENST00000256398.12

ELP3-201, Transcript of elongator acetyltransferase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELP3, Length 3,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELP3-201ENST00000256398 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
ELP3-201ENST00000256398 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
ELP3-201ENST00000256398 SUPT5HO00267 1087 aaKnown RBP17.04■□□□□ 0.32
ELP3-201ENST00000256398 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
ELP3-201ENST00000256398 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
ELP3-201ENST00000256398 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
ELP3-201ENST00000256398 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
ELP3-201ENST00000256398 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
ELP3-201ENST00000256398 HRCP23327 699 aa16.42■□□□□ 0.22
ELP3-201ENST00000256398 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
ELP3-201ENST00000256398 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
ELP3-201ENST00000256398 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
ELP3-201ENST00000256398 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
ELP3-201ENST00000256398 ABCC9O60706 1549 aa15.88■□□□□ 0.13
ELP3-201ENST00000256398 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
ELP3-201ENST00000256398 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
ELP3-201ENST00000256398 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
ELP3-201ENST00000256398 FAM9AQ8IZU1 332 aaPredicted RBP15.78■□□□□ 0.12
ELP3-201ENST00000256398 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
ELP3-201ENST00000256398 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
ELP3-201ENST00000256398 RB1CC1Q8TDY2 1594 aa15.73■□□□□ 0.11
ELP3-201ENST00000256398 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
ELP3-201ENST00000256398 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
ELP3-201ENST00000256398 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
ELP3-201ENST00000256398 WIZO95785 1651 aa15.45■□□□□ 0.06
ELP3-201ENST00000256398 NACADO15069 1562 aa15.36■□□□□ 0.05
ELP3-201ENST00000256398 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
ELP3-201ENST00000256398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
ELP3-201ENST00000256398 TTBK1Q5TCY1 1321 aaPredicted RBP15.26■□□□□ 0.03
ELP3-201ENST00000256398 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
ELP3-201ENST00000256398 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
ELP3-201ENST00000256398 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
ELP3-201ENST00000256398 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
ELP3-201ENST00000256398 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
ELP3-201ENST00000256398 SOGA1O94964 1423 aa15.12■□□□□ 0.01
ELP3-201ENST00000256398 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
ELP3-201ENST00000256398 NEUROD1Q13562 356 aa15.08■□□□□ 0.01
ELP3-201ENST00000256398 CEP162Q5TB80 1403 aa15.08■□□□□ 0
ELP3-201ENST00000256398 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
ELP3-201ENST00000256398 SMARCA2P51531 1590 aa15.07■□□□□ 0
ELP3-201ENST00000256398 SMARCA4P51532 1647 aa15.06■□□□□ 0
ELP3-201ENST00000256398 ACIN1Q9UKV3 1341 aaKnown RBP15.04■□□□□ -0
ELP3-201ENST00000256398 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
ELP3-201ENST00000256398 DIEXFQ68CQ4 756 aaKnown RBP15.04■□□□□ -0
ELP3-201ENST00000256398 PELP1Q8IZL8 1130 aaKnown RBP15.02■□□□□ -0
ELP3-201ENST00000256398 UBTFP17480 764 aaKnown RBP15□□□□□ -0.01
ELP3-201ENST00000256398 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
ELP3-201ENST00000256398 TNIKQ9UKE5 1360 aa14.99□□□□□ -0.01
ELP3-201ENST00000256398 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
ELP3-201ENST00000256398 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
ELP3-201ENST00000256398 GTF3C3Q9Y5Q9 886 aa14.93□□□□□ -0.02
ELP3-201ENST00000256398 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
ELP3-201ENST00000256398 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
ELP3-201ENST00000256398 EEA1Q15075 1411 aa14.85□□□□□ -0.03
ELP3-201ENST00000256398 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.03
ELP3-201ENST00000256398 CENPBP07199 599 aaPredicted RBP14.82□□□□□ -0.04
ELP3-201ENST00000256398 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
ELP3-201ENST00000256398 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
ELP3-201ENST00000256398 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
ELP3-201ENST00000256398 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
ELP3-201ENST00000256398 MIER1Q8N108 512 aa14.75□□□□□ -0.05
ELP3-201ENST00000256398 CLIP1P30622 1438 aa14.74□□□□□ -0.05
ELP3-201ENST00000256398 CEP164Q9UPV0 1460 aa14.73□□□□□ -0.05
ELP3-201ENST00000256398 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.05
ELP3-201ENST00000256398 KIF21BO75037 1637 aa14.69□□□□□ -0.06
ELP3-201ENST00000256398 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
ELP3-201ENST00000256398 VPS8Q8N3P4 1428 aa14.67□□□□□ -0.06
ELP3-201ENST00000256398 ATAD2BQ9ULI0 1458 aa14.64□□□□□ -0.07
ELP3-201ENST00000256398 APLP2Q06481 763 aa14.61□□□□□ -0.07
ELP3-201ENST00000256398 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
ELP3-201ENST00000256398 KANK4Q5T7N3 995 aaPredicted RBP14.56□□□□□ -0.08
ELP3-201ENST00000256398 TOP2BQ02880 1626 aa14.52□□□□□ -0.09
ELP3-201ENST00000256398 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
ELP3-201ENST00000256398 ARAP1Q96P48 1450 aa14.49□□□□□ -0.09
ELP3-201ENST00000256398 PRXQ9BXM0 1461 aa14.46□□□□□ -0.09
ELP3-201ENST00000256398 BIVM-ERCC5R4GMW8 1640 aa14.43□□□□□ -0.1
ELP3-201ENST00000256398 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
ELP3-201ENST00000256398 ITGAEP38570 1179 aa14.4□□□□□ -0.1
ELP3-201ENST00000256398 CUX1P39880 1505 aa14.4□□□□□ -0.1
ELP3-201ENST00000256398 CLSPNQ9HAW4 1339 aa14.37□□□□□ -0.11
ELP3-201ENST00000256398 RRBP1Q9P2E9 1410 aaKnown RBP14.36□□□□□ -0.11
ELP3-201ENST00000256398 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
ELP3-201ENST00000256398 KCNH8Q96L42 1107 aa14.32□□□□□ -0.12
ELP3-201ENST00000256398 KIF27Q86VH2 1401 aa14.32□□□□□ -0.12
ELP3-201ENST00000256398 CCNB3Q8WWL7 1395 aa14.31□□□□□ -0.12
ELP3-201ENST00000256398 SUPT16HQ9Y5B9 1047 aaKnown RBP14.31□□□□□ -0.12
ELP3-201ENST00000256398 CUX2O14529 1486 aa14.27□□□□□ -0.12
ELP3-201ENST00000256398 NCAPD3P42695 1498 aa14.27□□□□□ -0.12
ELP3-201ENST00000256398 RAB3GAP2Q9H2M9 1393 aa14.26□□□□□ -0.13
ELP3-201ENST00000256398 MYT1Q01538 1121 aa14.25□□□□□ -0.13
ELP3-201ENST00000256398 CFTRP13569 1480 aa14.24□□□□□ -0.13
ELP3-201ENST00000256398 HMGXB3Q12766 1538 aa14.23□□□□□ -0.13
ELP3-201ENST00000256398 MAPKBP1O60336 1514 aa14.23□□□□□ -0.13
ELP3-201ENST00000256398 IGF1RP08069 1367 aa14.22□□□□□ -0.13
ELP3-201ENST00000256398 SIN3AQ96ST3 1273 aa14.21□□□□□ -0.13
ELP3-201ENST00000256398 P3H3Q8IVL6 736 aa14.19□□□□□ -0.14
ELP3-201ENST00000256398 PHLDB1Q86UU1 1377 aa14.18□□□□□ -0.14
ELP3-201ENST00000256398 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
ELP3-201ENST00000256398 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
ELP3-201ENST00000256398 HIRIP3Q9BW71 556 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms