RNA–Protein interactions for RNA: ENST00000521986.5

PTK2-238, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 2,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-238	ENST00000521986	NISCH	Q9Y2I1	1504 aa		17.26	■□□□□ 0.35
PTK2-238	ENST00000521986	CCDC180	Q9P1Z9	1646 aa		14.86	□□□□□ -0.03
PTK2-238	ENST00000521986	SHROOM4	Q9ULL8	1493 aa		14.85	□□□□□ -0.03
PTK2-238	ENST00000521986	ZCCHC6	Q5VYS8	1495 aa	Known RBP	14.62	□□□□□ -0.07
PTK2-238	ENST00000521986	DCAF8L2	P0C7V8	631 aa		14.57	□□□□□ -0.08
PTK2-238	ENST00000521986	SUPT5H	O00267	1087 aa	Known RBP	14.56	□□□□□ -0.08
PTK2-238	ENST00000521986	ABCC9	O60706	1549 aa		14.38	□□□□□ -0.11
PTK2-238	ENST00000521986	MYO15B	Q96JP2	1530 aa		14.23	□□□□□ -0.13
PTK2-238	ENST00000521986	HRC	P23327	699 aa		14.23	□□□□□ -0.13
PTK2-238	ENST00000521986	CHIC1	Q5VXU3	224 aa		14.18	□□□□□ -0.14
PTK2-238	ENST00000521986	DCAF1	Q9Y4B6	1507 aa		14.14	□□□□□ -0.15
PTK2-238	ENST00000521986	PCGF6	Q9BYE7	350 aa		14.05	□□□□□ -0.16
PTK2-238	ENST00000521986	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.94	□□□□□ -0.18
PTK2-238	ENST00000521986	NACAD	O15069	1562 aa		13.93	□□□□□ -0.18
PTK2-238	ENST00000521986	SCRIB	Q14160	1630 aa		13.88	□□□□□ -0.19
PTK2-238	ENST00000521986	RB1CC1	Q8TDY2	1594 aa		13.83	□□□□□ -0.2
PTK2-238	ENST00000521986	LOC105371045	A0A1W2PR82	267 aa		13.81	□□□□□ -0.2
PTK2-238	ENST00000521986	RSF1	Q96T23	1441 aa	Predicted RBP	13.7	□□□□□ -0.22
PTK2-238	ENST00000521986	PABPN1	Q86U42	306 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
PTK2-238	ENST00000521986	TRIM26	Q12899	539 aa	Predicted RBP	13.66	□□□□□ -0.22
PTK2-238	ENST00000521986	CECR2	Q9BXF3	1484 aa		13.54	□□□□□ -0.24
PTK2-238	ENST00000521986	TRIM41	Q8WV44	630 aa		13.52	□□□□□ -0.25
PTK2-238	ENST00000521986	UNC13A	Q9UPW8	1703 aa		13.51	□□□□□ -0.25
PTK2-238	ENST00000521986	BICRA	Q9NZM4	1560 aa		13.48	□□□□□ -0.25
PTK2-238	ENST00000521986	ZEB1	P37275	1124 aa	Predicted RBP	13.47	□□□□□ -0.25
PTK2-238	ENST00000521986	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.47	□□□□□ -0.25
PTK2-238	ENST00000521986	MROH2B	Q7Z745	1585 aa		13.45	□□□□□ -0.26
PTK2-238	ENST00000521986	PELP1	Q8IZL8	1130 aa	Known RBP	13.41	□□□□□ -0.26
PTK2-238	ENST00000521986	EHMT2	Q96KQ7	1210 aa		13.4	□□□□□ -0.26
PTK2-238	ENST00000521986	WIZ	O95785	1651 aa		13.4	□□□□□ -0.27
PTK2-238	ENST00000521986	SCAF1	Q9H7N4	1312 aa	Known RBP	13.34	□□□□□ -0.27
PTK2-238	ENST00000521986	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.29	□□□□□ -0.28
PTK2-238	ENST00000521986	EIF4G1	Q04637	1599 aa	Known RBP	13.26	□□□□□ -0.29
PTK2-238	ENST00000521986	SMARCA4	P51532	1647 aa		13.23	□□□□□ -0.29
PTK2-238	ENST00000521986	TOP2A	P11388	1531 aa	Known RBP	13.15	□□□□□ -0.3
PTK2-238	ENST00000521986	ABCC8	Q09428	1581 aa		13.14	□□□□□ -0.31
PTK2-238	ENST00000521986	CCDC88B	A6NC98	1476 aa		13.11	□□□□□ -0.31
PTK2-238	ENST00000521986	SMARCA2	P51531	1590 aa		13.1	□□□□□ -0.31
PTK2-238	ENST00000521986	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.09	□□□□□ -0.31
PTK2-238	ENST00000521986	ATAD2B	Q9ULI0	1458 aa		13.09	□□□□□ -0.31
PTK2-238	ENST00000521986	ACIN1	Q9UKV3	1341 aa	Known RBP	13.09	□□□□□ -0.31
PTK2-238	ENST00000521986	NEUROD1	Q13562	356 aa		13.06	□□□□□ -0.32
PTK2-238	ENST00000521986	CCER1	Q8TC90	406 aa	Predicted RBP	13.06	□□□□□ -0.32
PTK2-238	ENST00000521986	SOGA1	O94964	1423 aa		13.02	□□□□□ -0.32
PTK2-238	ENST00000521986	PEG3	Q9GZU2	1588 aa		13	□□□□□ -0.33
PTK2-238	ENST00000521986	BAZ1B	Q9UIG0	1483 aa	Known RBP	13	□□□□□ -0.33
PTK2-238	ENST00000521986	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.99	□□□□□ -0.33
PTK2-238	ENST00000521986	DIEXF	Q68CQ4	756 aa	Known RBP	12.99	□□□□□ -0.33
PTK2-238	ENST00000521986	CEP162	Q5TB80	1403 aa		12.98	□□□□□ -0.33
PTK2-238	ENST00000521986	GTF3C3	Q9Y5Q9	886 aa		12.97	□□□□□ -0.33
PTK2-238	ENST00000521986	RUSC2	Q8N2Y8	1516 aa		12.97	□□□□□ -0.33
PTK2-238	ENST00000521986	WRN	Q14191	1432 aa	Predicted RBP eCLIP	12.95	□□□□□ -0.34
PTK2-238	ENST00000521986	CENPB	P07199	599 aa	Predicted RBP	12.95	□□□□□ -0.34
PTK2-238	ENST00000521986	NCAPD3	P42695	1498 aa		12.94	□□□□□ -0.34
PTK2-238	ENST00000521986	TNIK	Q9UKE5	1360 aa		12.92	□□□□□ -0.34
PTK2-238	ENST00000521986	CC2D2A	Q9P2K1	1620 aa		12.9	□□□□□ -0.34
PTK2-238	ENST00000521986	CSRNP3	Q8WYN3	585 aa		12.89	□□□□□ -0.35
PTK2-238	ENST00000521986	EEA1	Q15075	1411 aa		12.88	□□□□□ -0.35
PTK2-238	ENST00000521986	DNAJC5B	Q9UF47	199 aa		12.87	□□□□□ -0.35
PTK2-238	ENST00000521986	UBTF	P17480	764 aa	Known RBP	12.87	□□□□□ -0.35
PTK2-238	ENST00000521986	GOLGA3	Q08378	1498 aa		12.84	□□□□□ -0.35
PTK2-238	ENST00000521986	SYNJ1	O43426	1573 aa		12.83	□□□□□ -0.36
PTK2-238	ENST00000521986	HMGXB3	Q12766	1538 aa		12.83	□□□□□ -0.36
PTK2-238	ENST00000521986	MYT1	Q01538	1121 aa		12.82	□□□□□ -0.36
PTK2-238	ENST00000521986	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.78	□□□□□ -0.36
PTK2-238	ENST00000521986	CEP164	Q9UPV0	1460 aa		12.75	□□□□□ -0.37
PTK2-238	ENST00000521986	KIF21B	O75037	1637 aa		12.75	□□□□□ -0.37
PTK2-238	ENST00000521986	YTHDC1	Q96MU7	727 aa	Known RBP	12.73	□□□□□ -0.37
PTK2-238	ENST00000521986	CLIP1	P30622	1438 aa		12.71	□□□□□ -0.37
PTK2-238	ENST00000521986	RAPGEF2	Q9Y4G8	1499 aa		12.69	□□□□□ -0.38
PTK2-238	ENST00000521986	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.67	□□□□□ -0.38
PTK2-238	ENST00000521986	MIER1	Q8N108	512 aa		12.67	□□□□□ -0.38
PTK2-238	ENST00000521986	CADPS	Q9ULU8	1353 aa		12.67	□□□□□ -0.38
PTK2-238	ENST00000521986	CFTR	P13569	1480 aa		12.67	□□□□□ -0.38
PTK2-238	ENST00000521986	VPS8	Q8N3P4	1428 aa		12.66	□□□□□ -0.38
PTK2-238	ENST00000521986	RANGAP1	P46060	587 aa	Predicted RBP	12.66	□□□□□ -0.38
PTK2-238	ENST00000521986	NES	P48681	1621 aa		12.63	□□□□□ -0.39
PTK2-238	ENST00000521986	TOP2B	Q02880	1626 aa		12.63	□□□□□ -0.39
PTK2-238	ENST00000521986	BIVM-ERCC5	R4GMW8	1640 aa		12.58	□□□□□ -0.4
PTK2-238	ENST00000521986	APLP2	Q06481	763 aa		12.56	□□□□□ -0.4
PTK2-238	ENST00000521986	ARAP1	Q96P48	1450 aa		12.52	□□□□□ -0.4
PTK2-238	ENST00000521986	PRX	Q9BXM0	1461 aa		12.52	□□□□□ -0.4
PTK2-238	ENST00000521986	CUX1	P39880	1505 aa		12.52	□□□□□ -0.41
PTK2-238	ENST00000521986	ERICH3	Q5RHP9	1530 aa		12.51	□□□□□ -0.41
PTK2-238	ENST00000521986	FANCD2	Q9BXW9	1451 aa		12.51	□□□□□ -0.41
PTK2-238	ENST00000521986	KANK4	Q5T7N3	995 aa	Predicted RBP	12.47	□□□□□ -0.41
PTK2-238	ENST00000521986	KIF27	Q86VH2	1401 aa		12.43	□□□□□ -0.42
PTK2-238	ENST00000521986	LAMC3	Q9Y6N6	1575 aa		12.42	□□□□□ -0.42
PTK2-238	ENST00000521986	DHX57	Q6P158	1386 aa	Known RBP	12.42	□□□□□ -0.42
PTK2-238	ENST00000521986	PDS5B	Q9NTI5	1447 aa		12.42	□□□□□ -0.42
PTK2-238	ENST00000521986	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.4	□□□□□ -0.43
PTK2-238	ENST00000521986	ARHGAP35	Q9NRY4	1499 aa		12.39	□□□□□ -0.43
PTK2-238	ENST00000521986	CLSPN	Q9HAW4	1339 aa		12.38	□□□□□ -0.43
PTK2-238	ENST00000521986	FGD5	Q6ZNL6	1462 aa		12.38	□□□□□ -0.43
PTK2-238	ENST00000521986	RRBP1	Q9P2E9	1410 aa	Known RBP	12.37	□□□□□ -0.43
PTK2-238	ENST00000521986	URB2	Q14146	1524 aa	Known RBP	12.37	□□□□□ -0.43
PTK2-238	ENST00000521986	PRDM2	Q13029	1718 aa		12.36	□□□□□ -0.43
PTK2-238	ENST00000521986	RAD54L2	Q9Y4B4	1467 aa		12.36	□□□□□ -0.43
PTK2-238	ENST00000521986	TOPBP1	Q92547	1522 aa		12.36	□□□□□ -0.43
PTK2-238	ENST00000521986	CUX2	O14529	1486 aa		12.33	□□□□□ -0.44

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