RNA–Protein interactions for RNA: ENST00000574821.1

COX11-206, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

TSL 2

Gene COX11, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-206ENST00000574821 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
COX11-206ENST00000574821 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
COX11-206ENST00000574821 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
COX11-206ENST00000574821 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
COX11-206ENST00000574821 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
COX11-206ENST00000574821 FOXD1Q16676 465 aa19.28■□□□□ 0.68
COX11-206ENST00000574821 ADRA2BP18089 450 aa18.64■□□□□ 0.57
COX11-206ENST00000574821 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
COX11-206ENST00000574821 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
COX11-206ENST00000574821 MSH5O43196 834 aa17.76■□□□□ 0.43
COX11-206ENST00000574821 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
COX11-206ENST00000574821 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
COX11-206ENST00000574821 KCNA4P22459 653 aa17.02■□□□□ 0.32
COX11-206ENST00000574821 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
COX11-206ENST00000574821 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
COX11-206ENST00000574821 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
COX11-206ENST00000574821 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
COX11-206ENST00000574821 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
COX11-206ENST00000574821 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
COX11-206ENST00000574821 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
COX11-206ENST00000574821 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
COX11-206ENST00000574821 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
COX11-206ENST00000574821 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
COX11-206ENST00000574821 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
COX11-206ENST00000574821 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
COX11-206ENST00000574821 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
COX11-206ENST00000574821 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
COX11-206ENST00000574821 ZBTB22O15209 634 aa15.65■□□□□ 0.1
COX11-206ENST00000574821 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
COX11-206ENST00000574821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.57■□□□□ 0.086e-8■■■□□ 14.6
COX11-206ENST00000574821 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
COX11-206ENST00000574821 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
COX11-206ENST00000574821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
COX11-206ENST00000574821 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
COX11-206ENST00000574821 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
COX11-206ENST00000574821 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
COX11-206ENST00000574821 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
COX11-206ENST00000574821 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
COX11-206ENST00000574821 APLP2Q06481 763 aa15.03■□□□□ -0
COX11-206ENST00000574821 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
COX11-206ENST00000574821 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
COX11-206ENST00000574821 CAPN15O75808 1086 aa14.79□□□□□ -0.04
COX11-206ENST00000574821 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
COX11-206ENST00000574821 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
COX11-206ENST00000574821 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
COX11-206ENST00000574821 POLA2Q14181 598 aa14.54□□□□□ -0.08
COX11-206ENST00000574821 DSG3P32926 999 aa14.52□□□□□ -0.09
COX11-206ENST00000574821 ABCB7O75027 752 aa14.5□□□□□ -0.09
COX11-206ENST00000574821 ZBTB12Q9Y330 459 aaPredicted RBP14.36□□□□□ -0.11
COX11-206ENST00000574821 FBLN2P98095 1184 aa14.33□□□□□ -0.12
COX11-206ENST00000574821 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
COX11-206ENST00000574821 FKBP8Q14318 412 aa14.17□□□□□ -0.14
COX11-206ENST00000574821 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
COX11-206ENST00000574821 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
COX11-206ENST00000574821 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
COX11-206ENST00000574821 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
COX11-206ENST00000574821 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
COX11-206ENST00000574821 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
COX11-206ENST00000574821 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
COX11-206ENST00000574821 PROM2Q8N271 834 aa13.85□□□□□ -0.19
COX11-206ENST00000574821 SSUH2Q9Y2M2 353 aa13.85□□□□□ -0.19
COX11-206ENST00000574821 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
COX11-206ENST00000574821 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
COX11-206ENST00000574821 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
COX11-206ENST00000574821 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
COX11-206ENST00000574821 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
COX11-206ENST00000574821 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
COX11-206ENST00000574821 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
COX11-206ENST00000574821 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
COX11-206ENST00000574821 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
COX11-206ENST00000574821 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
COX11-206ENST00000574821 MIER1Q8N108 512 aa13.32□□□□□ -0.28
COX11-206ENST00000574821 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
COX11-206ENST00000574821 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
COX11-206ENST00000574821 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
COX11-206ENST00000574821 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
COX11-206ENST00000574821 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
COX11-206ENST00000574821 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
COX11-206ENST00000574821 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
COX11-206ENST00000574821 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
COX11-206ENST00000574821 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
COX11-206ENST00000574821 SPOCK2Q92563 424 aa13.11□□□□□ -0.31
COX11-206ENST00000574821 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
COX11-206ENST00000574821 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
COX11-206ENST00000574821 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
COX11-206ENST00000574821 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
COX11-206ENST00000574821 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
COX11-206ENST00000574821 NPM1P06748 294 aaKnown RBP eCLIP13.01□□□□□ -0.33
COX11-206ENST00000574821 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
COX11-206ENST00000574821 NUBP1P53384 320 aa12.95□□□□□ -0.34
COX11-206ENST00000574821 PKD2Q13563 968 aa12.88□□□□□ -0.35
COX11-206ENST00000574821 GSE1Q14687 1217 aa12.87□□□□□ -0.35
COX11-206ENST00000574821 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
COX11-206ENST00000574821 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
COX11-206ENST00000574821 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
COX11-206ENST00000574821 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
COX11-206ENST00000574821 TRIM41Q8WV44 630 aa12.8□□□□□ -0.36
COX11-206ENST00000574821 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
COX11-206ENST00000574821 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
COX11-206ENST00000574821 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms